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3R25

Crystal structure of enolase superfamily member from Vibrionales bacterium complexed with Mg and Glycerol in the active site

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0009063biological_processamino acid catabolic process
A0046872molecular_functionmetal ion binding
B0000287molecular_functionmagnesium ion binding
B0009063biological_processamino acid catabolic process
B0046872molecular_functionmetal ion binding
C0000287molecular_functionmagnesium ion binding
C0009063biological_processamino acid catabolic process
C0046872molecular_functionmetal ion binding
D0000287molecular_functionmagnesium ion binding
D0009063biological_processamino acid catabolic process
D0046872molecular_functionmetal ion binding
E0000287molecular_functionmagnesium ion binding
E0009063biological_processamino acid catabolic process
E0046872molecular_functionmetal ion binding
F0000287molecular_functionmagnesium ion binding
F0009063biological_processamino acid catabolic process
F0046872molecular_functionmetal ion binding
G0000287molecular_functionmagnesium ion binding
G0009063biological_processamino acid catabolic process
G0046872molecular_functionmetal ion binding
H0000287molecular_functionmagnesium ion binding
H0009063biological_processamino acid catabolic process
H0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AASP207
AGLU233
AGLU259
AHOH405
AHOH406
AHOH408

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 402
ChainResidue
BHOH407
BHOH408
BHOH1802
BASP207
BGLU233
BGLU259

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 402
ChainResidue
CASP207
CGLU233
CGLU259
CHOH404
CHOH405
CHOH407

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG D 402
ChainResidue
DASP207
DGLU233
DGLU259
DHOH405
DHOH406
DHOH408

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG E 402
ChainResidue
EASP207
EGLU233
EGLU259
EHOH405
EHOH407
EHOH410

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 402
ChainResidue
FASP207
FGLU233
FGLU259
FHOH404
FHOH405
FHOH407

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG G 402
ChainResidue
GASP207
GGLU233
GGLU259
GHOH404
GHOH405
GHOH1804

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG H 402
ChainResidue
HASP207
HGLU233
HGLU259
HHOH405
HHOH406
HHOH408

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 403
ChainResidue
BLYS346
BHOH1473
BHOH1542
EHOH638

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG D 403
ChainResidue
DLYS346
DHOH756
DHOH1632
DHOH1874
GHOH1429
GHOH1854

site_idBC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 403
ChainResidue
AGLN43
AGLN44
AHIS209
AHIS309
APRO311
AASP313
AHOH404
BTYR81
BTRP82

site_idBC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 404
ChainResidue
ATYR81
ATRP82
BGLN43
BGLN44
BHIS209
BGLU259
BHIS309
BPRO311
BASP313

site_idBC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL C 403
ChainResidue
CGLN43
CGLN44
CHIS209
CGLU259
CHIS309
CPRO311
CASP313
DTYR81
DTRP82

site_idBC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL D 404
ChainResidue
CTYR81
CTRP82
DGLN43
DGLN44
DHIS209
DGLU259
DHIS309
DPRO311
DASP313
DHOH1178

site_idBC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL E 403
ChainResidue
EPRO311
EASP313
FTYR81
FTRP82
EGLN43
EGLN44
EHIS209
EHIS309

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL F 403
ChainResidue
ETYR81
ETRP82
FGLN43
FGLN44
FHIS209
FHIS309
FPRO311
FASP313

site_idBC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL G 403
ChainResidue
GGLN43
GGLN44
GHIS209
GHIS309
GPRO311
GASP313
HTYR81
HTRP82

site_idBC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL H 403
ChainResidue
GTYR81
GTRP82
HGLN43
HGLN44
HHIS209
HHIS309
HPRO311
HASP313
HHOH405

Functional Information from PROSITE/UniProt
site_idPS00908
Number of Residues26
DetailsMR_MLE_1 Mandelate racemase / muconate lactonizing enzyme family signature 1. AiSGVDmALwDIkAKlagmPLhqLFG
ChainResidueDetails
AALA91-GLY116

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24697546","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues32
DetailsBinding site: {"evidences":[{"source":"PDB","id":"3SBF","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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