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3QNW

Caspase-6 in complex with Z-VAD-FMK inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0004197molecular_functioncysteine-type endopeptidase activity
A0006508biological_processproteolysis
A0008234molecular_functioncysteine-type peptidase activity
B0004197molecular_functioncysteine-type endopeptidase activity
B0006508biological_processproteolysis
B0008234molecular_functioncysteine-type peptidase activity
C0004197molecular_functioncysteine-type endopeptidase activity
C0006508biological_processproteolysis
C0008234molecular_functioncysteine-type peptidase activity
D0004197molecular_functioncysteine-type endopeptidase activity
D0006508biological_processproteolysis
D0008234molecular_functioncysteine-type peptidase activity
E0004197molecular_functioncysteine-type endopeptidase activity
E0006508biological_processproteolysis
E0008234molecular_functioncysteine-type peptidase activity
F0004197molecular_functioncysteine-type endopeptidase activity
F0006508biological_processproteolysis
F0008234molecular_functioncysteine-type peptidase activity
G0004197molecular_functioncysteine-type endopeptidase activity
G0006508biological_processproteolysis
G0008234molecular_functioncysteine-type peptidase activity
H0004197molecular_functioncysteine-type endopeptidase activity
H0006508biological_processproteolysis
H0008234molecular_functioncysteine-type peptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR CHAIN X OF Z-VAD-FMK
ChainResidue
AGLU123
BTRP227
BALA269
BLYS272
ACYS163
BALA213
BGLU214
BGLY215
BTYR216
BTYR217
BSER218
BHIS219

site_idAC2
Number of Residues12
DetailsBINDING SITE FOR CHAIN Y OF Z-VAD-FMK
ChainResidue
CALA162
CCYS163
DVAL212
DGLU214
DGLY215
DTYR216
DTYR217
DSER218
DHIS219
DTRP227
DVAL261
DLYS272

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR CHAIN Z OF Z-VAD-FMK
ChainResidue
GGLU123
GCYS163
HGLU214
HGLY215
HTYR216
HTYR217
HSER218
HLYS272

Functional Information from PROSITE/UniProt
site_idPS01121
Number of Residues15
DetailsCASPASE_HIS Caspase family histidine active site. HadadCfvCvFLSHG
ChainResidueDetails
AHIS108-GLY122

site_idPS01122
Number of Residues12
DetailsCASPASE_CYS Caspase family cysteine active site. KPKIFIIQACRG
ChainResidueDetails
ALYS154-GLY165

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsMOD_RES: Phosphoserine; by NUAK1 and AMPK => ECO:0000269|PubMed:15273717, ECO:0000269|PubMed:22483120, ECO:0000269|PubMed:32029622
ChainResidueDetails
BSER257
DSER257
FSER257
HSER257

site_idSWS_FT_FI2
Number of Residues8
DetailsLIPID: S-palmitoyl cysteine => ECO:0000269|PubMed:27911442
ChainResidueDetails
BCYS264
BCYS277
DCYS264
DCYS277
FCYS264
FCYS277
HCYS264
HCYS277

site_idSWS_FT_FI3
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:O08738
ChainResidueDetails
ASER79
CSER79
ESER79
GSER79

224004

PDB entries from 2024-08-21

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