3QGI

Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0003968	molecular_function	RNA-directed RNA polymerase activity
A	0039694	biological_process	viral RNA genome replication

Functional Information from PDB Data

site_id	AC1
Number of Residues	25
Details	BINDING SITE FOR RESIDUE 33F A 601

Chain	Residue
A	VAL179
A	SER368
A	LEU384
A	ILE413
A	MET414
A	PHE415
A	ILE447
A	TYR448
A	ALA450
A	TYR452
A	ILE454
A	TYR191
A	ILE462
A	LEU547
A	PHE551
A	TYR555
A	HOH1030
A	HOH1109
A	GLY192
A	PHE193
A	TYR195
A	SER196
A	PRO197
A	ARG200
A	SER288

---

site_id	AC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE GOL A 651

Chain	Residue
A	LEU26
A	ALA435
A	ARG436
A	HOH850

---

site_id	AC3
Number of Residues	12
Details	BINDING SITE FOR RESIDUE GOL A 652

Chain	Residue
A	ARG304
A	ALA305
A	GLY307
A	GLU361
A	VAL372
A	ARG380
A	SER478
A	HOH880
A	HOH934
A	HOH1085
A	HOH1153
A	HOH1236

---

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL A 653

Chain	Residue
A	SER407
A	GLY410
A	ASN411
A	GLU446
A	HOH891

---

site_id	AC5
Number of Residues	11
Details	BINDING SITE FOR RESIDUE GOL A 654

Chain	Residue
A	GLU361
A	ASN369
A	SER371
A	THR385
A	SER478
A	GLY480
A	GLU481
A	ARG484
A	HOH880
A	HOH1080
A	HOH1157

---

site_id	AC6
Number of Residues	9
Details	BINDING SITE FOR RESIDUE GOL A 655

Chain	Residue
A	ARG278
A	ASP458
A	TRP550
A	PHE551
A	HOH829
A	HOH927
A	HOH977
A	HOH989
A	HOH1004

---

site_id	AC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 656

Chain	Residue
A	SER29
A	ASP244
A	ARG250
A	PRO495
A	ARG503
A	HOH902

---

site_id	AC8
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 657

Chain	Residue
A	ARG32
A	HIS33
A	GLU237
A	GLN241
A	LYS254
A	HOH877
A	HOH942

---

site_id	AC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 658

Chain	Residue
A	GLU398
A	ASN406
A	TRP408
A	ARG436
A	GLN438
A	HOH779

---

site_id	BC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL A 659

Chain	Residue
A	MET423
A	ARG498
A	ARG501
A	GOL664
A	HOH1220

---

site_id	BC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 660

Chain	Residue
A	TYR524
A	THR537
A	PRO538
A	ILE539
A	ALA540
A	HOH796
A	HOH798

---

site_id	BC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 661

Chain	Residue
A	ALA450
A	GLY554
A	TYR555
A	HOH836
A	HOH1107
A	LEU91
A	TYR176

---

site_id	BC4
Number of Residues	6
Details	BINDING SITE FOR RESIDUE GOL A 662

Chain	Residue
A	SER39
A	ASN142
A	GLU143
A	VAL144
A	TRP397
A	HOH1127

---

site_id	BC5
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 663

Chain	Residue
A	ALA327
A	GLY328
A	ASN483
A	ALA486
A	ARG490
A	HOH909
A	HOH1069

---

site_id	BC6
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 664

Chain	Residue
A	LEU474
A	HIS475
A	TYR477
A	ARG501
A	TRP528
A	GOL659
A	HOH740

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	118
Details	Domain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P26663","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	2
Details	Modified residue: {"description":"Phosphoserine; by host","evidences":[{"source":"UniProtKB","id":"P26662","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

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