Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QGI

Crystal structure of the hepatitis C virus NS5B RNA-dependent RNA polymerase genotype 1a complex with N-[(2S)-butan-2-yl]-6-[(3R)-3-{[4-(trifluoromethoxy)benzyl]carbamoyl}-4-{[4-(trifluoromethoxy)phenyl]sulfonyl}piperazin-1-yl]pyridazine-3-carboxamide

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003968molecular_functionRNA-dependent RNA polymerase activity
A0039694biological_processviral RNA genome replication
Functional Information from PDB Data
site_idAC1
Number of Residues25
DetailsBINDING SITE FOR RESIDUE 33F A 601
ChainResidue
AVAL179
ASER368
ALEU384
AILE413
AMET414
APHE415
AILE447
ATYR448
AALA450
ATYR452
AILE454
ATYR191
AILE462
ALEU547
APHE551
ATYR555
AHOH1030
AHOH1109
AGLY192
APHE193
ATYR195
ASER196
APRO197
AARG200
ASER288

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 651
ChainResidue
ALEU26
AALA435
AARG436
AHOH850

site_idAC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL A 652
ChainResidue
AARG304
AALA305
AGLY307
AGLU361
AVAL372
AARG380
ASER478
AHOH880
AHOH934
AHOH1085
AHOH1153
AHOH1236

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 653
ChainResidue
ASER407
AGLY410
AASN411
AGLU446
AHOH891

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL A 654
ChainResidue
AGLU361
AASN369
ASER371
ATHR385
ASER478
AGLY480
AGLU481
AARG484
AHOH880
AHOH1080
AHOH1157

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 655
ChainResidue
AARG278
AASP458
ATRP550
APHE551
AHOH829
AHOH927
AHOH977
AHOH989
AHOH1004

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 656
ChainResidue
ASER29
AASP244
AARG250
APRO495
AARG503
AHOH902

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 657
ChainResidue
AARG32
AHIS33
AGLU237
AGLN241
ALYS254
AHOH877
AHOH942

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 658
ChainResidue
AGLU398
AASN406
ATRP408
AARG436
AGLN438
AHOH779

site_idBC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 659
ChainResidue
AMET423
AARG498
AARG501
AGOL664
AHOH1220

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 660
ChainResidue
ATYR524
ATHR537
APRO538
AILE539
AALA540
AHOH796
AHOH798

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 661
ChainResidue
AALA450
AGLY554
ATYR555
AHOH836
AHOH1107
ALEU91
ATYR176

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 662
ChainResidue
ASER39
AASN142
AGLU143
AVAL144
ATRP397
AHOH1127

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 663
ChainResidue
AALA327
AGLY328
AASN483
AALA486
AARG490
AHOH909
AHOH1069

site_idBC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 664
ChainResidue
ALEU474
AHIS475
ATYR477
AARG501
ATRP528
AGOL659
AHOH740

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P26663
ChainResidueDetails
AASP220
AASP318
AASP319

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine; by host => ECO:0000250|UniProtKB:P26662
ChainResidueDetails
ASER29
ASER42

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon