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3PZS

Crystal Structure of a pyridoxamine kinase from Yersinia pestis CO92

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0005524molecular_functionATP binding
A0005829cellular_componentcytosol
A0008478molecular_functionpyridoxal kinase activity
A0009443biological_processpyridoxal 5'-phosphate salvage
A0016301molecular_functionkinase activity
A0042816biological_processvitamin B6 metabolic process
B0000287molecular_functionmagnesium ion binding
B0005524molecular_functionATP binding
B0005829cellular_componentcytosol
B0008478molecular_functionpyridoxal kinase activity
B0009443biological_processpyridoxal 5'-phosphate salvage
B0016301molecular_functionkinase activity
B0042816biological_processvitamin B6 metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 287
ChainResidue
AHIS189
ACYS192
AGLU194
AHOH351
AHOH378
AHOH388

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 288
ChainResidue
AGLY222
AASP223
AHOH375
AHOH549
AHOH556
AVAL219
AGLY220
AVAL221

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE BME A 289
ChainResidue
AGLY14
AGLU262
AGLN266
AHOH315
BHOH418

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE BME A 290
ChainResidue
APHE40
ATRP49
ACYS52
AVAL53
AHIS189
AALA190
AASP191

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE BME A 291
ChainResidue
ACYS171
AALA200

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BME A 292
ChainResidue
ACYS192
AARG208
AHOH525

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 287
ChainResidue
BHIS189
BCYS192
BGLU194
BHOH332
BHOH369
BHOH425

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 288
ChainResidue
BVAL219
BGLY220
BVAL221
BGLY222
BASP223
BHOH341
BHOH381
BHOH401

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE BME B 289
ChainResidue
BHIS48
BTRP49
BCYS192
BCYS207
BARG208
BPRO209
BHOH421

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE BME B 290
ChainResidue
ATRP33
AHOH347
BGLY14
BHIS15
BGLU264
BGLN266
BHOH313
BHOH346

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01639
ChainResidueDetails
ASER9
BTHR44
BASP111
BALA143
BGLU148
BLYS181
BARG208
BASP223
ATHR44
AASP111
AALA143
AGLU148
ALYS181
AARG208
AASP223
BSER9

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PDB entries from 2024-07-24

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