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3PPB

Crystal structure of a putative tetR family transcription regulator (Shew_3104) from SHEWANELLA SP. PV-4 at 2.10 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0000976molecular_functiontranscription cis-regulatory region binding
A0003677molecular_functionDNA binding
A0003700molecular_functionDNA-binding transcription factor activity
A0006355biological_processregulation of DNA-templated transcription
B0000976molecular_functiontranscription cis-regulatory region binding
B0003677molecular_functionDNA binding
B0003700molecular_functionDNA-binding transcription factor activity
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 201
ChainResidue
AASN99
ALEU101
ALYS102

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 203
ChainResidue
APG4216
ALYS64
APHE106
ASER110
ALEU128
AHIS157
ATYR160

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 206
ChainResidue
AHIS27
ATHR114
APEG215
BVAL22
BGLY25
BLEU108

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 209
ChainResidue
AGLN107
BGLN107
BMSE111

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 210
ChainResidue
AGLU66
ATRP95

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 211
ChainResidue
AGLU66
ALYS102

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 212
ChainResidue
AGLU53
AGLU57
ATHR114
AVAL115
AGLU116

site_idAC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PEG A 215
ChainResidue
AGLN24
AGLY25
APHE26
AHIS27
AGLY28
ATYR109
AEDO206
BGLY25
BPHE26
BHIS27
BGLY28

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PG4 A 216
ChainResidue
ALEU88
AILE131
AHIS157
APHE187
AMSE191
AEDO203
AHOH333

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PG4 A 218
ChainResidue
APHE90
ATRP174
AGLN175
AALA177
AARG180
ASER181

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 202
ChainResidue
BASN99
BLEU101
BLYS102

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 204
ChainResidue
BGLN11
BGLY62
BGLU66

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 205
ChainResidue
BLYS64
BPHE67
BPHE106
BSER110
BLEU128
BHIS157
BPG4217

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 207
ChainResidue
AGLN175
BPHE46
BSER51
BLYS52
BGLU53
BHOH290

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 208
ChainResidue
AGLN175
AALA177
AHOH235
BLYS82
BASN189
BHOH300

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG B 213
ChainResidue
BPHE90
BARG180
BSER181
BHOH315
BHOH341

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PEG B 214
ChainResidue
BSER74
BALA91
BTHR94
BTRP95

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PG4 B 217
ChainResidue
BILE131
BGLN153
BTYR160
BPHE187
BEDO205
BHOH334

Functional Information from PROSITE/UniProt
site_idPS01081
Number of Residues32
DetailsHTH_TETR_1 TetR-type HTH domain signature. GFhgtSTatIareagVAtGtLFhHFpSKeqlL
ChainResidueDetails
AGLY25-LEU56

221051

PDB entries from 2024-06-12

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