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3PO5

Structure of a mutant of the large fragment of DNA polymerase I from Thermus Auqaticus in complex with an abasic site and ddATP

Functional Information from GO Data
ChainGOidnamespacecontents
A0001882molecular_functionnucleoside binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1
ChainResidue
AHOH122
AASP610
ADDS835

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PGE A 833
ChainResidue
AARG313
ATRP318
ALEU552

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PGE A 834
ChainResidue
CDC209
CDC210
ATHR544
APRO579
AASN580

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE DDS A 835
ChainResidue
AMG1
AHOH124
AHOH128
AARG587
AGLN613
AHIS639
ALYS663
APHE667
ATYR671
B2DA112

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 1
ChainResidue
BDC106
BDG107
BDG108
CDC209

Functional Information from PROSITE/UniProt
site_idPS00447
Number of Residues20
DetailsDNA_POLYMERASE_A DNA polymerase family A signature. RraAKtinFGvlYgmSahrL
ChainResidueDetails
AARG659-LEU678

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PDB entries from 2024-07-17

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