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3PN5

Crystal structure of Arabidopsis thaliana petide deformylase 1B (AtPDF1B) G41Q mutant

Functional Information from GO Data
ChainGOidnamespacecontents
A0042586molecular_functionpeptide deformylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 194
ChainResidue
AGLN48
ACYS91
AHIS133
AHIS137
AZN195
AHOH517

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 195
ChainResidue
AZN194
AHOH517
AGLN41
AGLN48
AGLU134

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN A 196
ChainResidue
AASP40
AGLU63
AHOH518

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 197
ChainResidue
AGLU66
AGLU160
AGLU179
AZN199

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 198
ChainResidue
AASP30
AASP34
ATYR37
AGLU69

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 199
ChainResidue
AMET1
AGLU157
AGLU160
AZN197

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues15
DetailsCompositional bias: {"description":"Basic and acidic residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsBinding site: {}
ChainResidueDetails

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PDB entries from 2025-12-17

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