3PN5
Crystal structure of Arabidopsis thaliana petide deformylase 1B (AtPDF1B) G41Q mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-02-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.934 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 56.930, 56.930, 147.410 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.470 - 2.300 |
R-factor | 0.305 |
Rwork | 0.301 |
R-free | 0.33800 |
Structure solution method | rigid body |
Starting model (for MR) | 3m6o |
RMSD bond length | 0.024 |
RMSD bond angle | 2.600 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | CNS |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.300 | 2.300 |
Number of reflections | 11253 | |
<I/σ(I)> | 13.64 | 5.82 |
Completeness [%] | 98.3 | 94 |
Redundancy | 6.5 | 5.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 12% PEG-3350, Zinc acetate 100mM, VAPOR DIFFUSION, HANGING DROP, temperature 293K |