3PKQ
Q83D Variant of S. Enterica RmlA with dGTP
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| A | 0009058 | biological_process | biosynthetic process |
| A | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| A | 0009243 | biological_process | O antigen biosynthetic process |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| A | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| B | 0009058 | biological_process | biosynthetic process |
| B | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| B | 0009243 | biological_process | O antigen biosynthetic process |
| B | 0016779 | molecular_function | nucleotidyltransferase activity |
| B | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| B | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| C | 0009058 | biological_process | biosynthetic process |
| C | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| C | 0009243 | biological_process | O antigen biosynthetic process |
| C | 0016779 | molecular_function | nucleotidyltransferase activity |
| C | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| C | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000287 | molecular_function | magnesium ion binding |
| D | 0008879 | molecular_function | glucose-1-phosphate thymidylyltransferase activity |
| D | 0009058 | biological_process | biosynthetic process |
| D | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
| D | 0009243 | biological_process | O antigen biosynthetic process |
| D | 0016779 | molecular_function | nucleotidyltransferase activity |
| D | 0019305 | biological_process | dTDP-rhamnose biosynthetic process |
| D | 0045226 | biological_process | extracellular polysaccharide biosynthetic process |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE DGT A 500 |
| Chain | Residue |
| A | LEU9 |
| A | ILE55 |
| A | ASP83 |
| A | SER85 |
| A | PRO86 |
| A | GLY110 |
| A | ASP111 |
| A | HOH356 |
| A | HOH375 |
| A | MG501 |
| A | GLY11 |
| A | GLY12 |
| A | SER13 |
| A | GLY14 |
| A | THR15 |
| A | ARG16 |
| A | LYS26 |
| A | GLN27 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG A 501 |
| Chain | Residue |
| A | ASP111 |
| A | ASP226 |
| A | DGT500 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE PEG A 293 |
| Chain | Residue |
| A | LYS5 |
| A | ASP104 |
| A | ALA126 |
| A | VAL127 |
| A | GLY132 |
| A | PHE178 |
| A | TYR179 |
| A | ASP180 |
| A | HOH318 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE PEG A 294 |
| Chain | Residue |
| A | HIS230 |
| A | LEU233 |
| A | ILE234 |
| A | SER237 |
| B | TYR32 |
| B | SER237 |
| B | HOH336 |
| site_id | AC5 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE DGT B 500 |
| Chain | Residue |
| B | LEU9 |
| B | GLY11 |
| B | GLY12 |
| B | SER13 |
| B | GLY14 |
| B | THR15 |
| B | ARG16 |
| B | LYS26 |
| B | GLN27 |
| B | ILE55 |
| B | ASP83 |
| B | PRO86 |
| B | GLY110 |
| B | ASP111 |
| B | HOH311 |
| B | MG501 |
| B | MG502 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG B 501 |
| Chain | Residue |
| B | LYS26 |
| B | ASP111 |
| B | ASP226 |
| B | DGT500 |
| site_id | AC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG B 502 |
| Chain | Residue |
| B | DGT500 |
| site_id | AC8 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DGT C 500 |
| Chain | Residue |
| C | LEU9 |
| C | GLY11 |
| C | GLY12 |
| C | SER13 |
| C | GLY14 |
| C | THR15 |
| C | ARG16 |
| C | LYS26 |
| C | GLN27 |
| C | ILE55 |
| C | ASP83 |
| C | SER85 |
| C | GLY110 |
| C | ASP111 |
| C | HOH302 |
| C | MG501 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG C 501 |
| Chain | Residue |
| C | LYS26 |
| C | ASP111 |
| C | ASP226 |
| C | DGT500 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PEG C 293 |
| Chain | Residue |
| C | TYR32 |
| C | SER237 |
| D | HIS230 |
| D | LEU233 |
| D | ILE234 |
| D | SER237 |
| site_id | BC2 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE DGT D 500 |
| Chain | Residue |
| D | HOH298 |
| D | MG502 |
| D | LEU9 |
| D | GLY11 |
| D | GLY12 |
| D | SER13 |
| D | GLY14 |
| D | THR15 |
| D | ARG16 |
| D | LYS26 |
| D | GLN27 |
| D | ILE55 |
| D | ASP83 |
| D | SER85 |
| D | GLY110 |
| D | ASP111 |
| site_id | BC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE MG D 502 |
| Chain | Residue |
| D | DGT500 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 8 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:P61887 |
| Chain | Residue | Details |
| A | ASP111 | |
| A | ASP226 | |
| B | ASP111 | |
| B | ASP226 | |
| C | ASP111 | |
| C | ASP226 | |
| D | ASP111 | |
| D | ASP226 |
