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3PKQ

Q83D Variant of S. Enterica RmlA with dGTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2009-03-09
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.9794
Spacegroup nameP 41
Unit cell lengths109.400, 109.400, 110.075
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.708 - 2.400
R-factor0.2148
Rwork0.212
R-free0.27080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1mp4
RMSD bond length0.009
RMSD bond angle1.181
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwarePHENIX (1.6.4_486)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.440
High resolution limit [Å]2.4006.5102.400
Rmerge0.0850.0350.526
Number of reflections49418
<I/σ(I)>9.1
Completeness [%]97.499.772.3
Redundancy5.65.82.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298Protein Solution (15 mg/ml RmlA Q83s protein, 10mM MOPS pH 7.5, 25mM dGTP) mixed in a 1:1 ratio with the well solution (10% MEPEG5K, 120mM MgCl2, 100mM Tris pH 8.5, 1mM Suramine) Cryoprotected with 20% Ethylene Glycol, 10% MEPEG5K, 120mM MgCl2, 100mM Tris pH 8.5, 1mM Suramine, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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