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3PDR

Crystal structure of manganese bound M-box RNA

Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE K X 1
ChainResidue
XG27
XU28
XA155
XG157
XC158
XHOH212
XHOH342

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K X 2
ChainResidue
XA106
XU67
XC75

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE K X 3
ChainResidue
XG73

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN X 176
ChainResidue
XG100
XC102
XA103
XU104
XHOH187
XHOH497

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN X 177
ChainResidue
XU23
XC99
XG100
XHOH203
XHOH209
XHOH316
XHOH327

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN X 178
ChainResidue
XU24
XA25
XHOH247
XHOH272
XHOH279
XHOH498

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN X 4
ChainResidue
XA72
XHOH288
XHOH299
XHOH471

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN X 7
ChainResidue
XA117
XA118
XU119
XHOH547

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN X 9
ChainResidue
XC35
XC36
XHOH504
XHOH522
XHOH523
XHOH524

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN X 10
ChainResidue
XA106
XG107
XHOH500
XHOH501
XHOH502
XHOH503

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MN X 12
ChainResidue
XG45
XHOH525
XHOH526
XHOH551

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN X 13
ChainResidue
XG127
XA128
XU129
XHOH505
XHOH506

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN X 14
ChainResidue
XA30
XG31
XHOH507
XHOH508
XHOH509
XHOH510

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MN X 179
ChainResidue
XG15
XHOH527

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN X 180
ChainResidue
XA46
XG126
XHOH542
XHOH543
XHOH544
XHOH545

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE K A 1
ChainResidue
AG27
AU28
AG29
AA155
AG157
AC158
AHOH181
AHOH225

site_idBC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 2
ChainResidue
AU67
AC75
AA106

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 176
ChainResidue
AG100
AC102
AA103
AU104
AHOH195
AHOH198

site_idCC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MN A 177
ChainResidue
AU23
AC99
AG100
AHOH217
AHOH220
AHOH230
AHOH472
AHOH546

site_idCC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 178
ChainResidue
AA25
AHOH222
AHOH244
AHOH255
AHOH258
AU24

site_idCC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 4
ChainResidue
AA72
AHOH320
AHOH332
AHOH490
AHOH491

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 5
ChainResidue
AA63
AHOH263
AHOH473
AHOH474
AHOH475
AHOH492

site_idCC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 6
ChainResidue
AA80
AU81
AHOH247
AHOH476
AHOH477
AHOH487

site_idCC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 7
ChainResidue
AA117
AA118
AU119
AHOH478
AHOH548
AHOH550

site_idCC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 9
ChainResidue
AC35
AC36
AHOH310
AHOH481
AHOH482
AHOH549

site_idCC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 10
ChainResidue
AA106
AG107
AHOH483
AHOH484
AHOH485
AHOH486

site_idCC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 11
ChainResidue
AA60
AHOH187
AHOH231
AHOH306
AHOH488
AHOH489

site_idDC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 12
ChainResidue
AG45
AHOH324
AHOH495
AHOH519
AHOH520

site_idDC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN A 13
ChainResidue
AG127
AA128
AU129
AHOH496
AHOH515
XHOH322

site_idDC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE MN A 179
ChainResidue
AG15

219140

PDB entries from 2024-05-01

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