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3P9O

Aerobic ternary complex of urate oxidase with azide and chloride

Functional Information from GO Data
ChainGOidnamespacecontents
A0004846molecular_functionurate oxidase activity
A0005777cellular_componentperoxisome
A0006144biological_processpurine nucleobase metabolic process
A0006145biological_processpurine nucleobase catabolic process
A0016491molecular_functionoxidoreductase activity
A0019628biological_processurate catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE AZI A 302
ChainResidue
AILE54
AALA56
ATHR57
APHE159
AGLN228
AHOH1003

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE AZI A 303
ChainResidue
AHOH1292
AALA5
AALA6
AARG7

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE AZI A 304
ChainResidue
AASP141
AILE142
AGLN187
ATRP188
AASN190
AHOH1289
AHOH1293

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE AZI A 305
ChainResidue
AGLN158
AHOH1004
AHOH1383

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 501
ChainResidue
ATHR57
AASN254
AGLY286
AHOH1165

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 502
ChainResidue
AILE88
ATYR91
AASN92
AILE94
AGLU136
AHOH1162

Functional Information from PROSITE/UniProt
site_idPS00366
Number of Residues28
DetailsURICASE Uricase signature. LtVLKSTnSqFwgFlrdeYttLketwdR
ChainResidueDetails
ALEU149-ARG176

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system => ECO:0000269|PubMed:24466188, ECO:0007744|PDB:4N3M, ECO:0007744|PDB:4N9M, ECO:0007744|PDB:4N9S, ECO:0007744|PDB:4N9V
ChainResidueDetails
ATHR57
AHIS256
ALYS10

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:9360612, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:1R51, ECO:0007744|PDB:1WS2, ECO:0007744|PDB:2FUB, ECO:0007744|PDB:2FXL, ECO:0007744|PDB:2IBA, ECO:0007744|PDB:2IC0, ECO:0007744|PDB:2ICQ, ECO:0007744|PDB:2PES, ECO:0007744|PDB:2ZKA, ECO:0007744|PDB:2ZKB, ECO:0007744|PDB:3BK8, ECO:0007744|PDB:3CKS, ECO:0007744|PDB:3CKU, ECO:0007744|PDB:3F2M, ECO:0007744|PDB:3GKO, ECO:0007744|PDB:3LBG, ECO:0007744|PDB:3LD4, ECO:0007744|PDB:3P9F, ECO:0007744|PDB:3PJK, ECO:0007744|PDB:3PK3, ECO:0007744|PDB:3PK4, ECO:0007744|PDB:3PK5, ECO:0007744|PDB:3PK6, ECO:0007744|PDB:3PK8, ECO:0007744|PDB:3PKF, ECO:0007744|PDB:3PKG, ECO:0007744|PDB:3PKH, ECO:0007744|PDB:3PKK, ECO:0007744|PDB:3PKL, ECO:0007744|PDB:3PKS, ECO:0007744|PDB:3PKT, ECO:0007744|PDB:3PKU, ECO:0007744|PDB:3PLE, ECO:0007744|PDB:3PLG, ECO:0007744|PDB:3PLH, ECO:0007744|PDB:3PLI, ECO:0007744|PDB:3PLJ, ECO:0007744|PDB:3PLM, ECO:0007744|PDB:4CW0, ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6, ECO:0007744|PDB:4N9S, ECO:0007744|PDB:4N9V, ECO:0007744|PDB:4OP6, ECO:0007744|PDB:4OP9, ECO:0007744|PDB:5FRC
ChainResidueDetails
ATHR57

site_idSWS_FT_FI3
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:9360612, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:3LBG, ECO:0007744|PDB:3LD4, ECO:0007744|PDB:4CW0, ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6, ECO:0007744|PDB:4N9S
ChainResidueDetails
AASP58

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:9360612, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:1R51, ECO:0007744|PDB:1WS3, ECO:0007744|PDB:1XT4, ECO:0007744|PDB:1XY3, ECO:0007744|PDB:2FUB, ECO:0007744|PDB:2IBA, ECO:0007744|PDB:2IC0, ECO:0007744|PDB:2ICQ, ECO:0007744|PDB:2PES, ECO:0007744|PDB:2ZKA, ECO:0007744|PDB:2ZKB, ECO:0007744|PDB:3BK8, ECO:0007744|PDB:3CKS, ECO:0007744|PDB:3CKU, ECO:0007744|PDB:3F2M, ECO:0007744|PDB:3GKO, ECO:0007744|PDB:3L8W, ECO:0007744|PDB:3P9F, ECO:0007744|PDB:3PJK, ECO:0007744|PDB:3PK3, ECO:0007744|PDB:3PK4, ECO:0007744|PDB:3PK5, ECO:0007744|PDB:3PK6, ECO:0007744|PDB:3PK8, ECO:0007744|PDB:3PKF, ECO:0007744|PDB:3PKG, ECO:0007744|PDB:3PKH, ECO:0007744|PDB:3PKK, ECO:0007744|PDB:3PKL, ECO:0007744|PDB:3PKS, ECO:0007744|PDB:3PKT, ECO:0007744|PDB:3PKU, ECO:0007744|PDB:3PLE, ECO:0007744|PDB:3PLG, ECO:0007744|PDB:3PLH, ECO:0007744|PDB:3PLI, ECO:0007744|PDB:3PLJ, ECO:0007744|PDB:3PLM, ECO:0007744|PDB:4CW0, ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6, ECO:0007744|PDB:4N9V, ECO:0007744|PDB:4OP6, ECO:0007744|PDB:4OP9, ECO:0007744|PDB:5FRC
ChainResidueDetails
APHE159

site_idSWS_FT_FI5
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:9360612, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:1R51, ECO:0007744|PDB:1WRR, ECO:0007744|PDB:1WS2, ECO:0007744|PDB:1WS3, ECO:0007744|PDB:1XT4, ECO:0007744|PDB:1XXJ, ECO:0007744|PDB:1XY3, ECO:0007744|PDB:2FUB, ECO:0007744|PDB:2IBA, ECO:0007744|PDB:2IC0, ECO:0007744|PDB:2ICQ, ECO:0007744|PDB:2PES, ECO:0007744|PDB:2ZKA, ECO:0007744|PDB:2ZKB, ECO:0007744|PDB:3BK8, ECO:0007744|PDB:3CKS, ECO:0007744|PDB:3CKU, ECO:0007744|PDB:3F2M, ECO:0007744|PDB:3GKO, ECO:0007744|PDB:3L8W, ECO:0007744|PDB:3LBG, ECO:0007744|PDB:3P9F, ECO:0007744|PDB:3PJK, ECO:0007744|PDB:3PK3, ECO:0007744|PDB:3PK4, ECO:0007744|PDB:3PK5, ECO:0007744|PDB:3PK6, ECO:0007744|PDB:3PK8, ECO:0007744|PDB:3PKF, ECO:0007744|PDB:3PKG, ECO:0007744|PDB:3PKH, ECO:0007744|PDB:3PKK, ECO:0007744|PDB:3PKL, ECO:0007744|PDB:3PKS, ECO:0007744|PDB:3PKT, ECO:0007744|PDB:3PKU, ECO:0007744|PDB:3PLE, ECO:0007744|PDB:3PLG, ECO:0007744|PDB:3PLH, ECO:0007744|PDB:3PLI, ECO:0007744|PDB:3PLJ, ECO:0007744|PDB:3PLM, ECO:0007744|PDB:4CW0, ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6, ECO:0007744|PDB:4N9V, ECO:0007744|PDB:4OP6, ECO:0007744|PDB:4OP9, ECO:0007744|PDB:5FRC
ChainResidueDetails
AARG176

site_idSWS_FT_FI6
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:9360612, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:1R51, ECO:0007744|PDB:1WRR, ECO:0007744|PDB:1XT4, ECO:0007744|PDB:1XXJ, ECO:0007744|PDB:1XY3, ECO:0007744|PDB:2FUB, ECO:0007744|PDB:2IBA, ECO:0007744|PDB:2IC0, ECO:0007744|PDB:2ICQ, ECO:0007744|PDB:2PES, ECO:0007744|PDB:2ZKA, ECO:0007744|PDB:2ZKB, ECO:0007744|PDB:3BK8, ECO:0007744|PDB:3CKS, ECO:0007744|PDB:3CKU, ECO:0007744|PDB:3F2M, ECO:0007744|PDB:3GKO, ECO:0007744|PDB:3L8W, ECO:0007744|PDB:3P9F, ECO:0007744|PDB:3PJK, ECO:0007744|PDB:3PK3, ECO:0007744|PDB:3PK4, ECO:0007744|PDB:3PK5, ECO:0007744|PDB:3PK6, ECO:0007744|PDB:3PK8, ECO:0007744|PDB:3PKF, ECO:0007744|PDB:3PKG, ECO:0007744|PDB:3PKH, ECO:0007744|PDB:3PKK, ECO:0007744|PDB:3PKL, ECO:0007744|PDB:3PKS, ECO:0007744|PDB:3PKT, ECO:0007744|PDB:3PKU, ECO:0007744|PDB:3PLE, ECO:0007744|PDB:3PLG, ECO:0007744|PDB:3PLH, ECO:0007744|PDB:3PLI, ECO:0007744|PDB:3PLJ, ECO:0007744|PDB:3PLM, ECO:0007744|PDB:4CW0, ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6, ECO:0007744|PDB:4N9V, ECO:0007744|PDB:4OP6, ECO:0007744|PDB:4OP9, ECO:0007744|PDB:5FRC
ChainResidueDetails
AVAL227

site_idSWS_FT_FI7
Number of Residues1
DetailsBINDING: BINDING => ECO:0000305|PubMed:9360612, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:1R51, ECO:0007744|PDB:1WRR, ECO:0007744|PDB:1WS2, ECO:0007744|PDB:1XT4, ECO:0007744|PDB:1XXJ, ECO:0007744|PDB:1XY3, ECO:0007744|PDB:2FUB, ECO:0007744|PDB:2IBA, ECO:0007744|PDB:2IC0, ECO:0007744|PDB:2ICQ, ECO:0007744|PDB:2PES, ECO:0007744|PDB:2ZKA, ECO:0007744|PDB:2ZKB, ECO:0007744|PDB:3BK8, ECO:0007744|PDB:3CKS, ECO:0007744|PDB:3CKU, ECO:0007744|PDB:3F2M, ECO:0007744|PDB:3GKO, ECO:0007744|PDB:3L8W, ECO:0007744|PDB:3LBG, ECO:0007744|PDB:3LD4, ECO:0007744|PDB:3P9F, ECO:0007744|PDB:3PJK, ECO:0007744|PDB:3PK3, ECO:0007744|PDB:3PK4, ECO:0007744|PDB:3PK5, ECO:0007744|PDB:3PK6, ECO:0007744|PDB:3PK8, ECO:0007744|PDB:3PKF, ECO:0007744|PDB:3PKG, ECO:0007744|PDB:3PKH, ECO:0007744|PDB:3PKK, ECO:0007744|PDB:3PKL, ECO:0007744|PDB:3PKS, ECO:0007744|PDB:3PKT, ECO:0007744|PDB:3PKU, ECO:0007744|PDB:3PLE, ECO:0007744|PDB:3PLG, ECO:0007744|PDB:3PLH, ECO:0007744|PDB:3PLI, ECO:0007744|PDB:3PLJ, ECO:0007744|PDB:3PLM, ECO:0007744|PDB:4CW0, ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6, ECO:0007744|PDB:4N9S, ECO:0007744|PDB:4N9V, ECO:0007744|PDB:4OP6, ECO:0007744|PDB:4OP9, ECO:0007744|PDB:5FRC
ChainResidueDetails
AGLN228

site_idSWS_FT_FI8
Number of Residues1
DetailsBINDING: BINDING => ECO:0007744|PDB:4CW2, ECO:0007744|PDB:4CW3, ECO:0007744|PDB:4CW6
ChainResidueDetails
AASN254

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: N-acetylserine => ECO:0000305|PubMed:1339455, ECO:0007744|PDB:1R4S, ECO:0007744|PDB:1R4U, ECO:0007744|PDB:1R51, ECO:0007744|PDB:1R56, ECO:0007744|PDB:1WRR, ECO:0007744|PDB:1WS2, ECO:0007744|PDB:1WS3, ECO:0007744|PDB:1XT4, ECO:0007744|PDB:1XXJ, ECO:0007744|PDB:1XY3, ECO:0007744|PDB:2FXL, ECO:0007744|PDB:3BJP, ECO:0007744|PDB:4FSK
ChainResidueDetails
ASER1

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 118
ChainResidueDetails
ALYS10hydrogen bond donor, proton acceptor, proton donor, proton relay
ATHR57electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AARG176electrostatic stabiliser
AGLN228electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
AHIS256hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay

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PDB entries from 2024-04-17

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