3ODH
Structure of OkrAI/DNA complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0009036 | molecular_function | type II site-specific deoxyribonuclease activity |
| A | 0009307 | biological_process | DNA restriction-modification system |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0009036 | molecular_function | type II site-specific deoxyribonuclease activity |
| B | 0009307 | biological_process | DNA restriction-modification system |
| E | 0000287 | molecular_function | magnesium ion binding |
| E | 0003677 | molecular_function | DNA binding |
| E | 0009036 | molecular_function | type II site-specific deoxyribonuclease activity |
| E | 0009307 | biological_process | DNA restriction-modification system |
| F | 0000287 | molecular_function | magnesium ion binding |
| F | 0003677 | molecular_function | DNA binding |
| F | 0009036 | molecular_function | type II site-specific deoxyribonuclease activity |
| F | 0009307 | biological_process | DNA restriction-modification system |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA A 195 |
| Chain | Residue |
| A | ASP86 |
| A | TRP100 |
| A | HOH262 |
| A | HOH640 |
| D | DG5 |
| D | HOH254 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE CA A 196 |
| Chain | Residue |
| A | HOH228 |
| A | HOH343 |
| D | DG4 |
| D | DG5 |
| D | HOH258 |
| A | GLU71 |
| A | ASP86 |
| A | HOH200 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA B 195 |
| Chain | Residue |
| B | ASP86 |
| B | GLU99 |
| B | HOH196 |
| B | HOH655 |
| C | DG5 |
| C | HOH256 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA E 195 |
| Chain | Residue |
| E | ASP86 |
| E | TRP100 |
| E | HOH197 |
| E | HOH665 |
| H | DG5 |
| H | HOH35 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA F 195 |
| Chain | Residue |
| F | ASP86 |
| F | GLU99 |
| F | HOH612 |
| F | HOH613 |
| F | HOH634 |
| G | DG5 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE CA H 13 |
| Chain | Residue |
| E | GLU71 |
| E | ASP86 |
| E | HOH220 |
| E | HOH705 |
| E | HOH706 |
| H | DG4 |
| H | DG5 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"P23940","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 12 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"20833632","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"3ODH","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
