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3ODH

Structure of OkrAI/DNA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Spacegroup nameP 21 21 21
Unit cell lengths80.982, 83.075, 119.670
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.300
R-factor0.15934
Rwork0.155
R-free0.23374
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.017
RMSD bond angle1.871
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwareCNS
Refinement softwareREFMAC (5.5.0102)
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.300
Number of reflections30786
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.729815-17% PEG 8000, 0.2 M calcium acetate, 0.1 M sodium cacodylate, pH 6.7, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111PEG 8000
211calcium acetate
311sodium cacodylate
412PEG 8000
512calcium acetate
612sodium cacodylate

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PDB entries from 2024-08-28

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