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3O86

Crystal structure of AmpC beta-lactamase in complex with a sulfonamide boronic acid inhibitor

Functional Information from GO Data
ChainGOidnamespacecontents
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0017001biological_processantibiotic catabolic process
A0030288cellular_componentouter membrane-bounded periplasmic space
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0017001biological_processantibiotic catabolic process
B0030288cellular_componentouter membrane-bounded periplasmic space
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE BSF A 1
ChainResidue
ASER64
ATYR150
AASN152
ATYR221
AGLY317
AALA318
AHOH449
AHOH637
AHOH638

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 2
ChainResidue
AHOH471
BARG80
BHOH531

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE BSF B 2
ChainResidue
BSER64
BGLN120
BTYR150
BASN152
BTYR221
BGLY317
BALA318
BHOH528
BHOH529

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 B 3
ChainResidue
AARG133
AHIS186
AHOH512
AHOH554
AHOH621
AHOH653
BLYS290
BHOH662

Functional Information from PROSITE/UniProt
site_idPS00336
Number of Residues8
DetailsBETA_LACTAMASE_C Beta-lactamase class-C active site. FELGSVSK
ChainResidueDetails
APHE60-LYS67

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Acyl-ester intermediate => ECO:0000255|PROSITE-ProRule:PRU10102, ECO:0000269|PubMed:11478888, ECO:0000269|PubMed:12005439, ECO:0000269|PubMed:16506777, ECO:0000269|PubMed:35486701, ECO:0000269|PubMed:6795623, ECO:0000269|PubMed:9819201, ECO:0000269|DOI:10.1021/ja001676x
ChainResidueDetails
ASER64
BSER64

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16506777, ECO:0000269|DOI:10.1021/ja001676x, ECO:0007744|PDB:1FCN, ECO:0007744|PDB:2FFY
ChainResidueDetails
ASER64
BSER64

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12005439, ECO:0000269|PubMed:12323371, ECO:0007744|PDB:1KVM, ECO:0007744|PDB:1LL9
ChainResidueDetails
AGLN120
BGLN120

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16506777, ECO:0007744|PDB:2FFY
ChainResidueDetails
ATYR150
BTYR150

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:12005439, ECO:0000269|PubMed:12323371, ECO:0000269|PubMed:16506777, ECO:0000269|DOI:10.1021/ja001676x, ECO:0007744|PDB:1FCN, ECO:0007744|PDB:1KVM, ECO:0007744|PDB:1LL9, ECO:0007744|PDB:2FFY
ChainResidueDetails
AASN152
AALA318
BASN152
BALA318

site_idSWS_FT_FI6
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12005439, ECO:0007744|PDB:1KVM
ChainResidueDetails
AASN343
BASN343

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PDB entries from 2024-10-30

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