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3O4P

DFPase at 0.85 Angstrom resolution (H atoms included)

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
A0047862molecular_functiondiisopropyl-fluorophosphatase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 401
ChainResidue
AGLU37
AGLY312
AILE313
APHE314
ADXE442
AHOH619

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 403
ChainResidue
AASP143
ALYS310
AHOH559
AHOH716
AHOH728
APRO8
ALEU9
APHE10

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE MES A 411
ChainResidue
AGLU7
ALYS43
APRO44
AASN67
AGLY68
ATYR69
AARG91
AARG264
APHE311
AME2471
AHOH508
AHOH628
AHOH728

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MES A 412
ChainResidue
AGLU65
ATHR102
APHE103
AGLN258
AHOH598
AHOH687
AHOH830
AHOH1129

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 421
ChainResidue
ALYS57
AVAL167
AASP168
AILE211
AMXE451
AHOH859

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE EDO A 422
ChainResidue
APHE86
APHE124
APHE158
ATHR159
ATHR160
APEG461
AHOH517
AHOH692
AHOH702
AHOH858
AHOH979

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 423
ChainResidue
AARG115
AGLU138
AASN289
ATRP293
AHOH516
AHOH617
AHOH959

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 424
ChainResidue
APRO196
ALYS198
ATHR223
AHIS224
APGE433
AHOH647
AHOH970

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 425
ChainResidue
AHIS219
AILE220
APRO221
AGLN258
AHOH876

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 426
ChainResidue
AMET148
AASP184
AGLU225
APHE314
APGE433
AHOH581
AHOH906
AHOH1001

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 427
ChainResidue
AGLY256
AGLY257
AGLN258
ALYS260
APEG462
AHOH877

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 428
ChainResidue
AGLU37
AHOH1082
AHOH1125

site_idBC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE PGE A 433
ChainResidue
AHOH1103
AMET148
AGLN172
AASP184
APRO196
ATHR197
AEDO424
AEDO426
AHOH644
AHOH826
AHOH970
AHOH1102

site_idBC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE PGE A 434
ChainResidue
AILE106
APHE158
AGLY162
AGLN163
ATHR279
ALYS280
ATHR281
AGLU296
AHOH521
AHOH544
AHOH685
AHOH735

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DXE A 442
ChainResidue
ATRP244
ALYS269
AHIS287
AGOL401
AHOH734

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DXE A 443
ChainResidue
APRO8
ALYS280
AGLU296
ATRP297
APEG461
AHOH532
AHOH770
AHOH893

site_idBC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MXE A 451
ChainResidue
ALYS58
ATHR59
AASN213
ALYS214
AEDO421
AHOH569
AHOH768
AHOH859
AHOH923

site_idBC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MXE A 452
ChainResidue
ALYS151
ATHR169
AALA170
APHE171
AGLU194
ALYS214
AHOH531

site_idCC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PEG A 461
ChainResidue
AGLN84
AILE106
ALYS280
AEDO422
ADXE443
AHOH639
AHOH702
AHOH832
AHOH858

site_idCC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PEG A 462
ChainResidue
ALYS63
AGLU65
AASP255
AGLY256
AGLY257
AEDO427
AHOH573
AHOH629
AHOH844

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ME2 A 471
ChainResidue
AVAL5
AGLU7
AHIS248
AARG264
AMES411
AHOH976

site_idCC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 491
ChainResidue
AGLU21
AASN120
AASN175
AASP229
AHOH502
AHOH524
AHOH604

site_idCC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 492
ChainResidue
AASP232
ALEU273
AHIS274
AHOH509
AHOH615
AHOH623

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000269|PubMed:15966726
ChainResidueDetails
AHIS287

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
AGLU21
AASN120
AASN175
AASP229

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:11435114, ECO:0000269|PubMed:14501113
ChainResidueDetails
AASP232
ALEU273
AHIS274

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 686
ChainResidueDetails
AGLU21increase nucleophilicity, metal ligand, proton acceptor
AGLU37electrostatic stabiliser, increase basicity
AASN120metal ligand
AASN175metal ligand
AASP229covalently attached, electrofuge, electrophile, increase nucleophilicity, metal ligand, nucleophile, proton acceptor
AHIS287increase nucleophilicity, proton acceptor

237735

PDB entries from 2025-06-18

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