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3O28

Ligand-binding domain of GluA2 (flip) ionotropic glutamate receptor in complex with an allosteric modulator

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE O28 A 264
ChainResidue
AILE92
AGLY219
AGLY219
ALEU239
ASER242
ALYS104
APRO105
APRO105
ASER108
ASER108
ASER217
ALYS218
ALYS218

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE GLU A 265
ChainResidue
ATYR61
APRO89
ALEU90
ATHR91
AARG96
ALEU138
AGLY141
ASER142
ATHR143
AGLU193
AHOH278
AHOH284
AHOH300

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 266
ChainResidue
AGLU24
AARG31
AHIS46
ALYS240
AGLN244
ASO4268
AHOH319

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 267
ChainResidue
ASER140
ALYS144
AARG148
AHOH341
AHOH373

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 268
ChainResidue
AHIS23
AGLU24
AARG31
ALYS240
ASO4266

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DMS A 269
ChainResidue
AGLU27
AASN29
AGLU30
AARG149
ALYS151
AHOH412

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 270
ChainResidue
AGLY62
AALA63
ATRP71
ATHR93
AVAL95
AARG96
AGLU145
AHOH312
AHOH330
AHOH373

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 271
ChainResidue
AGLU97
AASP101
APHE102
ALYS104

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 272
ChainResidue
ATRP159
AARG163

site_idBC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 273
ChainResidue
AGLU27
AARG149
ALYS151
AGLU243
AGLN244
AHOH310
AHOH367
AHOH417

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 274
ChainResidue
ASER194
AGLU198
AASN214
AHOH344

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 275
ChainResidue
AASN214
AASP216
ASER217
AASP248

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO89
ATHR91
AARG96
ASER142
ATHR143
AGLU193

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
AARG148
ALYS240

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184

site_idSWS_FT_FI6
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3

221716

PDB entries from 2024-06-26

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