3NYN
Crystal Structure of G Protein-Coupled Receptor Kinase 6 in Complex with Sangivamycin
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0004672 | molecular_function | protein kinase activity |
| A | 0004674 | molecular_function | protein serine/threonine kinase activity |
| A | 0004703 | molecular_function | G protein-coupled receptor kinase activity |
| A | 0005515 | molecular_function | protein binding |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006468 | biological_process | protein phosphorylation |
| A | 0007165 | biological_process | signal transduction |
| A | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
| A | 0008277 | biological_process | regulation of G protein-coupled receptor signaling pathway |
| A | 0009966 | biological_process | regulation of signal transduction |
| A | 0016020 | cellular_component | membrane |
| A | 0016055 | biological_process | Wnt signaling pathway |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016740 | molecular_function | transferase activity |
| A | 0047696 | molecular_function | beta-adrenergic receptor kinase activity |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0004672 | molecular_function | protein kinase activity |
| B | 0004674 | molecular_function | protein serine/threonine kinase activity |
| B | 0004703 | molecular_function | G protein-coupled receptor kinase activity |
| B | 0005515 | molecular_function | protein binding |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0006468 | biological_process | protein phosphorylation |
| B | 0007165 | biological_process | signal transduction |
| B | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
| B | 0008277 | biological_process | regulation of G protein-coupled receptor signaling pathway |
| B | 0009966 | biological_process | regulation of signal transduction |
| B | 0016020 | cellular_component | membrane |
| B | 0016055 | biological_process | Wnt signaling pathway |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016740 | molecular_function | transferase activity |
| B | 0047696 | molecular_function | beta-adrenergic receptor kinase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE SGV A 577 |
| Chain | Residue |
| A | LEU192 |
| A | SER328 |
| A | ASP329 |
| A | HOH558 |
| A | GLY193 |
| A | VAL200 |
| A | LYS215 |
| A | THR264 |
| A | MET266 |
| A | ASP270 |
| A | GLU315 |
| A | LEU318 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 578 |
| Chain | Residue |
| A | SER27 |
| A | ARG187 |
| A | ARG206 |
| B | ACE1 |
| B | GLU2 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 579 |
| Chain | Residue |
| A | PRO94 |
| A | ASP95 |
| A | ASN452 |
| A | LYS454 |
| A | ARG455 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 A 580 |
| Chain | Residue |
| A | TRP30 |
| A | ARG31 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 581 |
| Chain | Residue |
| A | LYS29 |
| A | ASN184 |
| A | ARG206 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 A 582 |
| Chain | Residue |
| A | ARG59 |
| A | ASN242 |
| B | TRP539 |
| B | LYS540 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BU3 A 583 |
| Chain | Residue |
| A | TYR53 |
| A | CYS57 |
| A | ARG64 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 584 |
| Chain | Residue |
| A | LYS272 |
| A | HIS277 |
| A | LYS475 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 585 |
| Chain | Residue |
| A | LYS183 |
| A | THR255 |
| A | LYS256 |
| site_id | BC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE SGV B 577 |
| Chain | Residue |
| B | ALA213 |
| B | LYS215 |
| B | LEU263 |
| B | THR264 |
| B | MET266 |
| B | ASP270 |
| B | GLU315 |
| B | LEU318 |
| B | ASP329 |
| B | HOH558 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 578 |
| Chain | Residue |
| A | ACE1 |
| A | GLU2 |
| B | SER27 |
| B | ARG187 |
| B | ARG206 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 579 |
| Chain | Residue |
| B | PRO94 |
| B | ASP95 |
| B | ARG98 |
| B | ASN452 |
| B | ARG455 |
| site_id | BC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 B 580 |
| Chain | Residue |
| B | TRP30 |
| B | ARG31 |
| site_id | BC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 581 |
| Chain | Residue |
| B | LYS29 |
| B | ASN184 |
| B | ARG206 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 582 |
| Chain | Residue |
| A | TRP539 |
| A | LYS540 |
| B | ARG59 |
| B | ASN242 |
| site_id | BC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE BU3 B 583 |
| Chain | Residue |
| B | TYR53 |
| B | CYS57 |
| B | GLU58 |
| B | ARG64 |
| B | ARG68 |
| site_id | BC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 584 |
| Chain | Residue |
| B | LYS272 |
| B | HIS277 |
| B | LYS475 |
| site_id | BC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 585 |
| Chain | Residue |
| B | LYS183 |
| B | THR255 |
| B | LYS256 |
Functional Information from PROSITE/UniProt
| site_id | PS00107 |
| Number of Residues | 33 |
| Details | PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGKGGFGEVCaCqvratgkmyackklekk.RIKK |
| Chain | Residue | Details |
| A | LEU192-LYS224 |
| site_id | PS00108 |
| Number of Residues | 13 |
| Details | PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IvYrDLKpeNILL |
| Chain | Residue | Details |
| A | ILE307-LEU319 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 236 |
| Details | Domain: {"description":"RGS","evidences":[{"source":"PROSITE-ProRule","id":"PRU00171","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 130 |
| Details | Domain: {"description":"AGC-kinase C-terminal","evidences":[{"source":"PROSITE-ProRule","id":"PRU00618","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00159","evidenceCode":"ECO:0000255"},{"source":"PROSITE-ProRule","id":"PRU10027","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 36 |
| Details | Binding site: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18669648","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19690332","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
