3NYN
Crystal Structure of G Protein-Coupled Receptor Kinase 6 in Complex with Sangivamycin
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004672 | molecular_function | protein kinase activity |
A | 0004674 | molecular_function | protein serine/threonine kinase activity |
A | 0004703 | molecular_function | G protein-coupled receptor kinase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005886 | cellular_component | plasma membrane |
A | 0006468 | biological_process | protein phosphorylation |
A | 0007165 | biological_process | signal transduction |
A | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
A | 0008277 | biological_process | regulation of G protein-coupled receptor signaling pathway |
A | 0009966 | biological_process | regulation of signal transduction |
A | 0016020 | cellular_component | membrane |
A | 0016055 | biological_process | Wnt signaling pathway |
A | 0047696 | molecular_function | beta-adrenergic receptor kinase activity |
B | 0004672 | molecular_function | protein kinase activity |
B | 0004674 | molecular_function | protein serine/threonine kinase activity |
B | 0004703 | molecular_function | G protein-coupled receptor kinase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005886 | cellular_component | plasma membrane |
B | 0006468 | biological_process | protein phosphorylation |
B | 0007165 | biological_process | signal transduction |
B | 0007186 | biological_process | G protein-coupled receptor signaling pathway |
B | 0008277 | biological_process | regulation of G protein-coupled receptor signaling pathway |
B | 0009966 | biological_process | regulation of signal transduction |
B | 0016020 | cellular_component | membrane |
B | 0016055 | biological_process | Wnt signaling pathway |
B | 0047696 | molecular_function | beta-adrenergic receptor kinase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE SGV A 577 |
Chain | Residue |
A | LEU192 |
A | SER328 |
A | ASP329 |
A | HOH558 |
A | GLY193 |
A | VAL200 |
A | LYS215 |
A | THR264 |
A | MET266 |
A | ASP270 |
A | GLU315 |
A | LEU318 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 578 |
Chain | Residue |
A | SER27 |
A | ARG187 |
A | ARG206 |
B | ACE1 |
B | GLU2 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 579 |
Chain | Residue |
A | PRO94 |
A | ASP95 |
A | ASN452 |
A | LYS454 |
A | ARG455 |
site_id | AC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 580 |
Chain | Residue |
A | TRP30 |
A | ARG31 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 581 |
Chain | Residue |
A | LYS29 |
A | ASN184 |
A | ARG206 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 582 |
Chain | Residue |
A | ARG59 |
A | ASN242 |
B | TRP539 |
B | LYS540 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE BU3 A 583 |
Chain | Residue |
A | TYR53 |
A | CYS57 |
A | ARG64 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 584 |
Chain | Residue |
A | LYS272 |
A | HIS277 |
A | LYS475 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 585 |
Chain | Residue |
A | LYS183 |
A | THR255 |
A | LYS256 |
site_id | BC1 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE SGV B 577 |
Chain | Residue |
B | ALA213 |
B | LYS215 |
B | LEU263 |
B | THR264 |
B | MET266 |
B | ASP270 |
B | GLU315 |
B | LEU318 |
B | ASP329 |
B | HOH558 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 578 |
Chain | Residue |
A | ACE1 |
A | GLU2 |
B | SER27 |
B | ARG187 |
B | ARG206 |
site_id | BC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 579 |
Chain | Residue |
B | PRO94 |
B | ASP95 |
B | ARG98 |
B | ASN452 |
B | ARG455 |
site_id | BC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 B 580 |
Chain | Residue |
B | TRP30 |
B | ARG31 |
site_id | BC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 581 |
Chain | Residue |
B | LYS29 |
B | ASN184 |
B | ARG206 |
site_id | BC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 582 |
Chain | Residue |
A | TRP539 |
A | LYS540 |
B | ARG59 |
B | ASN242 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE BU3 B 583 |
Chain | Residue |
B | TYR53 |
B | CYS57 |
B | GLU58 |
B | ARG64 |
B | ARG68 |
site_id | BC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 584 |
Chain | Residue |
B | LYS272 |
B | HIS277 |
B | LYS475 |
site_id | BC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 585 |
Chain | Residue |
B | LYS183 |
B | THR255 |
B | LYS256 |
Functional Information from PROSITE/UniProt
site_id | PS00107 |
Number of Residues | 33 |
Details | PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGKGGFGEVCaCqvratgkmyackklekk.RIKK |
Chain | Residue | Details |
A | LEU192-LYS224 |
site_id | PS00108 |
Number of Residues | 13 |
Details | PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. IvYrDLKpeNILL |
Chain | Residue | Details |
A | ILE307-LEU319 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027 |
Chain | Residue | Details |
A | ASP311 | |
B | ASP311 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | BINDING: |
Chain | Residue | Details |
A | LEU192 | |
A | LYS215 | |
A | THR264 | |
A | GLU315 | |
B | LEU192 | |
B | LYS215 | |
B | THR264 | |
B | GLU315 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332 |
Chain | Residue | Details |
A | SER484 | |
B | SER484 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | MOD_RES: Phosphothreonine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332 |
Chain | Residue | Details |
A | THR485 | |
B | THR485 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:O70293 |
Chain | Residue | Details |
A | SER566 | |
A | SER568 | |
B | SER566 | |
B | SER568 |
site_id | SWS_FT_FI6 |
Number of Residues | 6 |
Details | LIPID: S-palmitoyl cysteine => ECO:0000305|PubMed:7961702 |
Chain | Residue | Details |
A | CYS561 | |
A | CYS562 | |
A | CYS565 | |
B | CYS561 | |
B | CYS562 | |
B | CYS565 |