3NUB
WbpE, an Aminotransferase from Pseudomonas aeruginosa Involved in O-antigen Assembly in Complex with Product as the External Aldimine
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000271 | biological_process | polysaccharide biosynthetic process |
A | 0006065 | biological_process | UDP-glucuronate biosynthetic process |
A | 0008483 | molecular_function | transaminase activity |
A | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
A | 0009243 | biological_process | O antigen biosynthetic process |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
A | 0071555 | biological_process | cell wall organization |
B | 0000271 | biological_process | polysaccharide biosynthetic process |
B | 0006065 | biological_process | UDP-glucuronate biosynthetic process |
B | 0008483 | molecular_function | transaminase activity |
B | 0009103 | biological_process | lipopolysaccharide biosynthetic process |
B | 0009243 | biological_process | O antigen biosynthetic process |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE UD0 A 400 |
Chain | Residue |
A | ILE5 |
A | ALA158 |
A | GLN159 |
A | SER180 |
A | PHE182 |
A | SER184 |
A | LYS185 |
A | HIS308 |
A | TYR309 |
A | HOH368 |
A | HOH486 |
A | LEU7 |
A | HOH493 |
A | HOH495 |
A | HOH497 |
A | HOH499 |
A | HOH500 |
A | HOH501 |
B | GLY29 |
B | TYR31 |
B | ILE32 |
B | ASN227 |
A | ASN58 |
B | ARG229 |
A | GLY59 |
A | THR60 |
A | THR84 |
A | TYR85 |
A | VAL130 |
A | ASP156 |
site_id | AC2 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE GOL A 360 |
Chain | Residue |
A | ALA57 |
A | ASP192 |
A | ASP231 |
A | HOH383 |
A | HOH391 |
A | HOH454 |
A | HOH509 |
B | ALA57 |
B | ASP192 |
B | ASP231 |
B | HOH494 |
B | HOH554 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 361 |
Chain | Residue |
A | ARG24 |
A | ARG27 |
A | HIS28 |
A | HOH560 |
B | GLY75 |
B | ARG123 |
site_id | AC4 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE UD0 B 400 |
Chain | Residue |
A | HIS213 |
A | ASN227 |
A | ARG229 |
B | PHE4 |
B | ASN58 |
B | GLY59 |
B | THR60 |
B | THR84 |
B | TYR85 |
B | ALA87 |
B | VAL130 |
B | ASP156 |
B | ALA158 |
B | GLN159 |
B | SER180 |
B | PHE182 |
B | SER184 |
B | LYS185 |
B | THR305 |
B | HIS308 |
B | TYR309 |
B | HOH419 |
B | HOH612 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 12 |
Details | BINDING: BINDING => ECO:0007744|PDB:3NUB |
Chain | Residue | Details |
A | HIS308 | |
A | TYR309 | |
B | GLY29 | |
B | TYR31 | |
B | SER184 | |
B | ARG229 | |
B | HIS308 | |
B | TYR309 | |
A | GLY29 | |
A | TYR31 | |
A | SER184 | |
A | ARG229 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | MOD_RES: N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:20604544 |
Chain | Residue | Details |
A | LYS185 | |
B | LYS185 |