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3NU9

Crystal Structure of HIV-1 Protease Mutant I84V with Antiviral Drug Amprenavir

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE 478 A 401
ChainResidue
AASP25
AVAL82
BASP125
BGLY127
BASP129
BASP130
BVAL132
BGLY148
BGLY149
BILE150
BVAL182
AGLY27
BHOH1001
AALA28
AASP30
AVAL32
AGLY48
AGLY49
AILE50
APRO81

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 502
ChainResidue
ATHR74
AASN88

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 507
ChainResidue
AGLU21

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 509
ChainResidue
ATHR91
BARG141

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 510
ChainResidue
ATHR12

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 511
ChainResidue
ALYS7
AARG8

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 512
ChainResidue
ALYS55

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 514
ChainResidue
ATHR12
AGLY68

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 517
ChainResidue
AGLN61

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 522
ChainResidue
AIOD523

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD A 523
ChainResidue
AGLN18
ASER37
AIOD522

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 524
ChainResidue
AGLU35

site_idBC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 526
ChainResidue
AGLY17

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 528
ChainResidue
ALEU19

site_idBC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 533
ChainResidue
APRO79

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 501
ChainResidue
BTHR174
BASN188

site_idBC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 503
ChainResidue
BTHR112

site_idBC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 505
ChainResidue
BLYS170

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 506
ChainResidue
BGLU121
BGLU134

site_idCC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 508
ChainResidue
BARG108

site_idCC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 513
ChainResidue
ALYS20
BLYS114

site_idCC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 516
ChainResidue
BGLY140

site_idCC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 519
ChainResidue
BIOD531

site_idCC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 525
ChainResidue
BARG141

site_idCC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 530
ChainResidue
BLYS107

site_idCC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 531
ChainResidue
BIOD519
BHOH1036

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"12924029","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

242199

PDB entries from 2025-09-24

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