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3NQ6

Crystal structure of the mutant P180A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor 6-azaUMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE UP6 A 301
ChainResidue
AASP20
AARG203
AHOH440
AHOH418
AHOH466
AHOH407
BASP75
BILE76
BTHR79
AHOH427
AHOH523
ALYS42
ALYS72
AMET126
ASER127
AALA180
AVAL182
AGLN185
AGLY202

site_idAC2
Number of Residues20
DetailsBINDING SITE FOR RESIDUE UP6 B 301
ChainResidue
AASP75
AILE76
ATHR79
BASP20
BLYS42
BASP70
BLYS72
BMET126
BSER127
BALA180
BVAL182
BGLN185
BGLY202
BARG203
BHOH435
BHOH413
BHOH468
BHOH448
BHOH517
BHOH433

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 302
ChainResidue
AGLU33
AASN210
AALA212
AHOH454
BTHR159
BPRO161
BGLY186
AHOH424
AHOH401

Functional Information from PROSITE/UniProt
site_idPS00156
Number of Residues14
DetailsOMPDECASE Orotidine 5'-phosphate decarboxylase active site. IIaDfKvaDIPeTN
ChainResidueDetails
AILE67-ASN80

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor
ChainResidueDetails
ALYS72
BLYS72

site_idSWS_FT_FI2
Number of Residues14
DetailsBINDING:
ChainResidueDetails
AASP20
BASP70
BSER127
BALA180
BGLY202
BARG203
ALYS42
AASP70
ASER127
AALA180
AGLY202
AARG203
BASP20
BLYS42

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PDB entries from 2024-09-11

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