3NGJ
Crystal structure of a putative deoxyribose-phosphate aldolase from Entamoeba histolytica
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004139 | molecular_function | deoxyribose-phosphate aldolase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0009264 | biological_process | deoxyribonucleotide catabolic process |
| A | 0016052 | biological_process | carbohydrate catabolic process |
| A | 0016829 | molecular_function | lyase activity |
| A | 0046386 | biological_process | deoxyribose phosphate catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0004139 | molecular_function | deoxyribose-phosphate aldolase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0009264 | biological_process | deoxyribonucleotide catabolic process |
| B | 0016052 | biological_process | carbohydrate catabolic process |
| B | 0016829 | molecular_function | lyase activity |
| B | 0046386 | biological_process | deoxyribose phosphate catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0004139 | molecular_function | deoxyribose-phosphate aldolase activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0009264 | biological_process | deoxyribonucleotide catabolic process |
| C | 0016052 | biological_process | carbohydrate catabolic process |
| C | 0016829 | molecular_function | lyase activity |
| C | 0046386 | biological_process | deoxyribose phosphate catabolic process |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004139 | molecular_function | deoxyribose-phosphate aldolase activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0009264 | biological_process | deoxyribonucleotide catabolic process |
| D | 0016052 | biological_process | carbohydrate catabolic process |
| D | 0016829 | molecular_function | lyase activity |
| D | 0046386 | biological_process | deoxyribose phosphate catabolic process |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA A 249 |
| Chain | Residue |
| A | SER119 |
| A | GLY120 |
| A | ALA122 |
| A | HOH263 |
| A | HOH276 |
| A | HOH306 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 250 |
| Chain | Residue |
| B | HOH711 |
| A | ASP192 |
| A | HIS218 |
| B | HIS162 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN A 251 |
| Chain | Residue |
| A | CYS40 |
| A | CYS61 |
| A | THR62 |
| A | ASP92 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA B 249 |
| Chain | Residue |
| B | SER119 |
| B | GLY120 |
| B | ALA122 |
| B | HOH226 |
| B | HOH227 |
| B | HOH355 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 250 |
| Chain | Residue |
| B | ASP192 |
| B | HIS218 |
| B | HOH853 |
| B | HOH989 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN B 251 |
| Chain | Residue |
| B | CYS40 |
| B | CYS61 |
| B | THR62 |
| B | ASP92 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA C 249 |
| Chain | Residue |
| C | SER119 |
| C | GLY120 |
| C | ALA122 |
| C | HOH220 |
| C | HOH240 |
| C | HOH318 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN C 250 |
| Chain | Residue |
| C | ASP192 |
| C | HIS218 |
| D | HIS162 |
| D | HOH222 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN C 251 |
| Chain | Residue |
| C | CYS40 |
| C | CYS61 |
| C | THR62 |
| C | ASP92 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE NA D 249 |
| Chain | Residue |
| D | SER119 |
| D | GLY120 |
| D | ALA122 |
| D | HOH220 |
| D | HOH433 |
| D | HOH462 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ZN D 250 |
| Chain | Residue |
| D | ASP192 |
| D | HIS218 |
| D | HOH918 |
| site_id | BC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ZN D 251 |
| Chain | Residue |
| D | CYS40 |
| D | CYS61 |
| D | THR62 |
| D | ASP92 |
| site_id | BC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO B 252 |
| Chain | Residue |
| B | LYS103 |
| B | TYR105 |
| B | ASP106 |
| B | ARG144 |
| B | HOH366 |
| B | HOH451 |
| B | HOH588 |
| site_id | BC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO C 252 |
| Chain | Residue |
| C | THR190 |
| C | PHE191 |
| C | ASP192 |
| C | ALA212 |
| C | GLY216 |
| C | HIS218 |
| C | HOH260 |
| site_id | BC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO C 219 |
| Chain | Residue |
| C | ASP192 |
| C | MET195 |
| C | LYS196 |
| C | HOH744 |
| C | HOH994 |
| D | THR161 |
