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3N9O

ceKDM7A from C.elegans, complex with H3K4me3 peptide, H3K9me2 peptide and NOG

Functional Information from GO Data
ChainGOidnamespacecontents
C0000786cellular_componentnucleosome
C0003677molecular_functionDNA binding
C0030527molecular_functionstructural constituent of chromatin
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FE2 A 1
ChainResidue
AOGA4
AHOH7
AHIS495
AASP497
AHIS567

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 2
ChainResidue
ACYS198
ACYS201
AHIS252
ACYS255

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 3
ChainResidue
ACYS244
ACYS247
ACYS271
ACYS274

site_idAC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE OGA A 4
ChainResidue
AFE21
AHOH7
AHOH33
AASN421
ALEU423
ATHR492
AHIS495
AASP497
ATYR505
ALYS512
AHIS567
AVAL569
CMLY9

Functional Information from PROSITE/UniProt
site_idPS01359
Number of Residues77
DetailsZF_PHD_1 Zinc finger PHD-type signature. CggCgkftheddlialeeekkkekekplmskkkshhhkkndfqw.....IgCds..Cqtw.YHflCsgleqfeyylyek................................FfCpkC
ChainResidueDetails
ACYS198-CYS274

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:11807039, ECO:0000269|PubMed:11969256, ECO:0000269|PubMed:14614817, ECO:0000269|PubMed:14702046
ChainResidueDetails
CLYS4

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000269|PubMed:11807039, ECO:0000269|PubMed:14702046
ChainResidueDetails
CMLY9

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:10975519, ECO:0000269|PubMed:11807039, ECO:0000269|PubMed:12015116, ECO:0000269|PubMed:12837290, ECO:0000269|PubMed:14614817, ECO:0000269|PubMed:14622138, ECO:0000269|PubMed:14702046
ChainResidueDetails
CSER10
AASP497

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:11807039, ECO:0000269|PubMed:14702046, ECO:0000269|PubMed:3803587
ChainResidueDetails
CLYS14
ALYS512
AHIS567

219140

PDB entries from 2024-05-01

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