3MHU
Crystal structure of dihydroorotate dehydrogenase from Leishmania major in complex with 5-Nitroorotic acid
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0004152 | molecular_function | dihydroorotate dehydrogenase activity |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005737 | cellular_component | cytoplasm |
A | 0006106 | biological_process | fumarate metabolic process |
A | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
A | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
A | 0006222 | biological_process | UMP biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
A | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
A | 0097014 | cellular_component | ciliary plasm |
A | 1990663 | molecular_function | dihydroorotate dehydrogenase (fumarate) activity |
B | 0000166 | molecular_function | nucleotide binding |
B | 0004152 | molecular_function | dihydroorotate dehydrogenase activity |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005737 | cellular_component | cytoplasm |
B | 0006106 | biological_process | fumarate metabolic process |
B | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
B | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
B | 0006222 | biological_process | UMP biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
B | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
B | 0097014 | cellular_component | ciliary plasm |
B | 1990663 | molecular_function | dihydroorotate dehydrogenase (fumarate) activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE FMN A 313 |
Chain | Residue |
A | ALA19 |
A | LYS165 |
A | ILE194 |
A | ASN195 |
A | GLY222 |
A | GLY223 |
A | VAL226 |
A | CYS249 |
A | GLY250 |
A | GLY251 |
A | GLY272 |
A | ALA20 |
A | THR273 |
A | EJZ314 |
A | HOH339 |
A | HOH374 |
A | HOH378 |
A | HOH398 |
A | GLY21 |
A | LYS44 |
A | SER45 |
A | TYR59 |
A | ASN68 |
A | MET70 |
A | ASN128 |
site_id | AC2 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE EJZ A 314 |
Chain | Residue |
A | LYS44 |
A | SER45 |
A | ASN68 |
A | MET70 |
A | GLY71 |
A | LEU72 |
A | ASN128 |
A | CYS131 |
A | ASN195 |
A | SER196 |
A | FMN313 |
A | HOH461 |
A | HOH519 |
site_id | AC3 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE FMN B 313 |
Chain | Residue |
B | ALA19 |
B | ALA20 |
B | GLY21 |
B | LYS44 |
B | SER45 |
B | TYR59 |
B | ASN68 |
B | MET70 |
B | ASN128 |
B | LYS165 |
B | ILE194 |
B | ASN195 |
B | GLY222 |
B | GLY223 |
B | VAL226 |
B | CYS249 |
B | GLY250 |
B | GLY251 |
B | GLY272 |
B | THR273 |
B | EJZ314 |
B | HOH325 |
B | HOH328 |
B | HOH449 |
site_id | AC4 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE EJZ B 314 |
Chain | Residue |
B | LYS44 |
B | SER45 |
B | ASN68 |
B | MET70 |
B | GLY71 |
B | LEU72 |
B | ASN128 |
B | CYS131 |
B | PRO132 |
B | ASN195 |
B | SER196 |
B | FMN313 |
B | HOH322 |
B | HOH435 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 315 |
Chain | Residue |
A | VAL202 |
A | ILE203 |
A | HOH479 |
A | HOH552 |
B | LEU231 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 315 |
Chain | Residue |
A | LEU227 |
A | LEU231 |
A | HOH574 |
B | VAL202 |
B | ILE203 |
B | HOH508 |
site_id | AC7 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 316 |
Chain | Residue |
A | GLU206 |
A | THR207 |
A | GLU208 |
B | GLU206 |
B | THR207 |
B | GLU208 |
B | ARG310 |
B | HOH462 |
B | HOH580 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 317 |
Chain | Residue |
B | PRO132 |
B | ASN199 |
B | LYS215 |
A | ASP171 |
A | PHE172 |
A | ALA173 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 318 |
Chain | Residue |
A | ASN199 |
A | LYS215 |
B | ASP171 |
B | PHE172 |
B | ALA173 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 A 319 |
Chain | Residue |
A | HIS160 |
A | SER161 |
A | HOH367 |
A | HOH549 |
A | HOH584 |