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3LZV

Structure of Nelfinavir-resistant HIV-1 protease (D30N/N88D) in complex with Darunavir.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE 017 A 200
ChainResidue
AASP25
BGLY27
BALA28
BASN30
BGLY48
BGLY49
BPRO81
BVAL82
AGLY27
AALA28
AASP29
AASN30
AGLY48
AILE50
AHOH113
BASP25

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 100
ChainResidue
AARG14
AGLY16
AGLY17
BARG14
BGLY16
BGLY17

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 101
ChainResidue
ALYS20
AGLU21
AASN83
AHOH117

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 102
ChainResidue
AGLN18
AMET36
AASN37
BPRO39
BGLY40

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 103
ChainResidue
AARG87
AHOH111
AHOH123
BLYS7
BARG8

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ACT A 104
ChainResidue
AARG8

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ACT A 105
ChainResidue
AARG14
APRO44
ALYS45
AHOH202
BILE72

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 B 100
ChainResidue
BLEU19
BLYS20
BGLU21
BGLU34
BASN83

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT B 505
ChainResidue
BLYS43
BLYS45
BGLN58

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADNTVL
ChainResidueDetails
AALA22-LEU33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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