3LYF

Crystal Structure of the Rift Valley Fever Virus Nucleocapsid Protein

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003723	molecular_function	RNA binding
A	0019013	cellular_component	viral nucleocapsid
A	0019028	cellular_component	viral capsid
A	0030430	cellular_component	host cell cytoplasm
A	0042025	cellular_component	host cell nucleus
A	0042802	molecular_function	identical protein binding
A	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
A	0044177	cellular_component	host cell Golgi apparatus
A	0044423	cellular_component	virion component
A	1990904	cellular_component	ribonucleoprotein complex
B	0003723	molecular_function	RNA binding
B	0019013	cellular_component	viral nucleocapsid
B	0019028	cellular_component	viral capsid
B	0030430	cellular_component	host cell cytoplasm
B	0042025	cellular_component	host cell nucleus
B	0042802	molecular_function	identical protein binding
B	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
B	0044177	cellular_component	host cell Golgi apparatus
B	0044423	cellular_component	virion component
B	1990904	cellular_component	ribonucleoprotein complex
C	0003723	molecular_function	RNA binding
C	0019013	cellular_component	viral nucleocapsid
C	0019028	cellular_component	viral capsid
C	0030430	cellular_component	host cell cytoplasm
C	0042025	cellular_component	host cell nucleus
C	0042802	molecular_function	identical protein binding
C	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
C	0044177	cellular_component	host cell Golgi apparatus
C	0044423	cellular_component	virion component
C	1990904	cellular_component	ribonucleoprotein complex
D	0003723	molecular_function	RNA binding
D	0019013	cellular_component	viral nucleocapsid
D	0019028	cellular_component	viral capsid
D	0030430	cellular_component	host cell cytoplasm
D	0042025	cellular_component	host cell nucleus
D	0042802	molecular_function	identical protein binding
D	0044172	cellular_component	host cell endoplasmic reticulum-Golgi intermediate compartment
D	0044177	cellular_component	host cell Golgi apparatus
D	0044423	cellular_component	virion component
D	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL A 246

Chain	Residue
A	PRO141
A	ARG142
A	HIS143
A	PHE221
A	GLY222
A	LEU223
A	HOH480

---

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE GOL B 246

Chain	Residue
B	PRO141
B	ARG142
B	HIS143
B	HOH275
B	HOH604
A	HOH286
B	TYR140

---

site_id	AC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE GOL C 246

Chain	Residue
C	TYR140
C	PRO141
C	ARG142
C	HIS143
C	HOH400

---

site_id	AC4
Number of Residues	8
Details	BINDING SITE FOR RESIDUE GOL D 246

Chain	Residue
D	PRO141
D	ARG142
D	HIS143
D	PHE221
D	GLY222
D	LEU223
D	HOH520
D	HOH528

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	27
Details	Binding site: {"evidences":[{"source":"PubMed","id":"23129612","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"P21701","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	4
Details	Site: {"description":"Important for dimerization","evidences":[{"source":"PubMed","id":"20547879","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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