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3L0O

Structure of RNA-free Rho transcription termination factor from Thermotoga maritima

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003723molecular_functionRNA binding
A0004386molecular_functionhelicase activity
A0005524molecular_functionATP binding
A0006353biological_processDNA-templated transcription termination
A0008186molecular_functionATP-dependent activity, acting on RNA
A0016787molecular_functionhydrolase activity
A0016887molecular_functionATP hydrolysis activity
B0003676molecular_functionnucleic acid binding
B0003723molecular_functionRNA binding
B0004386molecular_functionhelicase activity
B0005524molecular_functionATP binding
B0006353biological_processDNA-templated transcription termination
B0008186molecular_functionATP-dependent activity, acting on RNA
B0016787molecular_functionhydrolase activity
B0016887molecular_functionATP hydrolysis activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IUM A 428
ChainResidue
AGLU76
AASP77
ASER82
AASP84

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IUM A 429
ChainResidue
AARG37
AASP40
AASP377
AGLU378

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE IUM A 430
ChainResidue
ALYS38
AARG39
AGLU150
AHOH483
AGLU14

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 431
ChainResidue
ALYS185
AALA186
AGLY187
ALYS188
ATHR189

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 432
ChainResidue
AARG73
ALYS242
ALYS245

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 433
ChainResidue
ALYS174
AHIS203
APRO204
AASP205
ATHR206
AHOH456
AHOH462

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 434
ChainResidue
ASER350
AARG351
AGLN352
AGLU396

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 435
ChainResidue
AARG276
ASER329

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IUM B 428
ChainResidue
BGLU326
BSER350
BARG351
BGLU396

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE IUM B 429
ChainResidue
ATYR147
AARG371
BTHR189
BLYS193
BGLU219
BASP222

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IUM B 430
ChainResidue
BARG371
BARG371
BGLU373
BGLU373

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE IUM B 431
ChainResidue
BGLU76
BASP77
BSER82
BASN83
BASP84

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 432
ChainResidue
BGLY187
BLYS188
BTHR189
BNA436
BHOH456
BHOH468

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 433
ChainResidue
BARG177
BASN344
BARG370
BARG371
BHOH458

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 434
ChainResidue
AASN344
AGLU346
AARG370
BLYS185

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 435
ChainResidue
BLYS174
BHIS203
BPRO204
BASP205
BTHR206

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE NA B 436
ChainResidue
BLYS185
BSO4432

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE NA B 437
ChainResidue
BGLY328
BGLU333

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01884
ChainResidueDetails
AGLY173
ALYS185
AARG216
BGLY173
BLYS185
BARG216

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PDB entries from 2024-07-24

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