3KLO

Vibrio cholerae VpsT bound to c-di-GMP

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0000976	molecular_function	transcription cis-regulatory region binding
A	0001216	molecular_function	DNA-binding transcription activator activity
A	0003677	molecular_function	DNA binding
A	0006355	biological_process	regulation of DNA-templated transcription
A	0032993	cellular_component	protein-DNA complex
A	0045893	biological_process	positive regulation of DNA-templated transcription
B	0000166	molecular_function	nucleotide binding
B	0000976	molecular_function	transcription cis-regulatory region binding
B	0001216	molecular_function	DNA-binding transcription activator activity
B	0003677	molecular_function	DNA binding
B	0006355	biological_process	regulation of DNA-templated transcription
B	0032993	cellular_component	protein-DNA complex
B	0045893	biological_process	positive regulation of DNA-templated transcription
C	0000166	molecular_function	nucleotide binding
C	0000976	molecular_function	transcription cis-regulatory region binding
C	0001216	molecular_function	DNA-binding transcription activator activity
C	0003677	molecular_function	DNA binding
C	0006355	biological_process	regulation of DNA-templated transcription
C	0032993	cellular_component	protein-DNA complex
C	0045893	biological_process	positive regulation of DNA-templated transcription
D	0000166	molecular_function	nucleotide binding
D	0000976	molecular_function	transcription cis-regulatory region binding
D	0001216	molecular_function	DNA-binding transcription activator activity
D	0003677	molecular_function	DNA binding
D	0006355	biological_process	regulation of DNA-templated transcription
D	0032993	cellular_component	protein-DNA complex
D	0045893	biological_process	positive regulation of DNA-templated transcription

Functional Information from PDB Data

site_id	AC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE C2E A 225

Chain	Residue
A	LYS120
A	TRP131
A	THR133
A	ARG134
A	HOH235
B	ARG134
B	C2E225
B	TAR226

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site_id	AC2
Number of Residues	9
Details	BINDING SITE FOR RESIDUE C2E B 225

Chain	Residue
A	C2E225
B	TRP131
B	THR133
B	ARG134
B	TAR226
B	HOH237
B	HOH238
B	HOH239
A	ARG134

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site_id	AC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE TAR B 226

Chain	Residue
A	ARG134
A	LYS135
A	C2E225
B	LYS124
B	GLU129
B	C2E225

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site_id	AC4
Number of Residues	9
Details	BINDING SITE FOR RESIDUE C2E C 225

Chain	Residue
C	LYS120
C	MET130
C	TRP131
C	THR133
C	ARG134
C	HOH229
D	ARG134
D	C2E225
D	TAR226

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site_id	AC5
Number of Residues	8
Details	BINDING SITE FOR RESIDUE C2E D 225

Chain	Residue
C	ARG134
C	C2E225
D	LYS120
D	TRP131
D	THR133
D	ARG134
D	TAR226
D	HOH235

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site_id	AC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE TAR D 226

Chain	Residue
C	ARG134
C	LYS135
C	C2E225
D	LYS124
D	GLU129
D	C2E225

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Functional Information from PROSITE/UniProt

site_id	PS00622
Number of Residues	28
Details	HTH_LUXR_1 LuxR-type HTH domain signature. GasNieIAdkLfVsenTVktHlhNVfkK

Chain	Residue	Details
A	GLY173-LYS200

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