Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KK2

HIV-1 reverse transcriptase-DNA complex with dATP bound in the nucleotide binding site

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 561
ChainResidue
AGLY436
AALA437
AASN460
AARG461
BALA288

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 562
ChainResidue
AGLU328
AGLN340
BGLY196

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 600
ChainResidue
AVAL111
AASP185
ADTP563
AASP110

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 601
ChainResidue
AASP443
AGLY444
AGLU478
AASP498

site_idAC5
Number of Residues16
DetailsBINDING SITE FOR RESIDUE DTP A 563
ChainResidue
ALYS65
AARG72
AASP110
AVAL111
AGLY112
AASP113
AALA114
ATYR115
AGLN151
AASP185
ALYS219
AHOH582
AMG600
PDOC822
TDT705
TDG706

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 P 2
ChainResidue
PDG816
PDG817
TDG710

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues190
DetailsDomain: {"description":"Reverse transcriptase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00405","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsRegion: {"description":"RT 'primer grip'","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues32
DetailsMotif: {"description":"Tryptophan repeat motif","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"12206668","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues4
DetailsSite: {"description":"Essential for RT p66/p51 heterodimerization","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues1
DetailsSite: {"description":"Cleavage; by viral protease; partial","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon