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3K96

2.1 Angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsA) from Coxiella burnetii

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0006072biological_processglycerol-3-phosphate metabolic process
A0006650biological_processglycerophospholipid metabolic process
A0008654biological_processphospholipid biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0046167biological_processglycerol-3-phosphate biosynthetic process
A0046168biological_processglycerol-3-phosphate catabolic process
A0046474biological_processglycerophospholipid biosynthetic process
A0047952molecular_functionglycerol-3-phosphate dehydrogenase [NAD(P)+] activity
A0051287molecular_functionNAD binding
A0141153molecular_functionglycerol-3-phosphate dehydrogenase (NADP+) activity
B0000166molecular_functionnucleotide binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0006072biological_processglycerol-3-phosphate metabolic process
B0006650biological_processglycerophospholipid metabolic process
B0008654biological_processphospholipid biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0046167biological_processglycerol-3-phosphate biosynthetic process
B0046168biological_processglycerol-3-phosphate catabolic process
B0046474biological_processglycerophospholipid biosynthetic process
B0047952molecular_functionglycerol-3-phosphate dehydrogenase [NAD(P)+] activity
B0051287molecular_functionNAD binding
B0141153molecular_functionglycerol-3-phosphate dehydrogenase (NADP+) activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BME B 401
ChainResidue
BSER38
BASP42
BCYS67

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EPE B 402
ChainResidue
BGLN45
BLYS64
BTYR66
BCYS67
BASP68
BHOH481

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EPE A 403
ChainResidue
AGLN45
ATYR66
ACYS67
AASP68

Functional Information from PROSITE/UniProt
site_idPS00957
Number of Residues22
DetailsNAD_G3PDH NAD-dependent glycerol-3-phosphate dehydrogenase signature. GSVKNILAiAtGIsdGLkLGsN
ChainResidueDetails
AGLY189-ASN210

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00394
ChainResidueDetails
ALYS192
BLYS192

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00394
ChainResidueDetails
ASER15
AARG256
AASN257
AGLU282
BSER15
BTRP16
BLYS110
BGLY137
BSER139
BALA141
BLYS192
ATRP16
BASP245
BSER255
BARG256
BASN257
BGLU282
ALYS110
AGLY137
ASER139
AALA141
ALYS192
AASP245
ASER255

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1evy
ChainResidueDetails
ALYS192
ATHR249

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1evy
ChainResidueDetails
BLYS192
BTHR249

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PDB entries from 2024-08-28

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