3K96
2.1 Angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsA) from Coxiella burnetii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-10-09 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 85.272, 88.452, 97.289 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.270 - 2.100 |
R-factor | 0.16654 |
Rwork | 0.164 |
R-free | 0.21037 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1z82 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.388 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.5.0051) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.140 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.090 | 0.628 |
Number of reflections | 44246 | |
<I/σ(I)> | 21.02 | 3.4 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.3 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | Protein solution: 7.6 mg/mL, 0.5M Sodium chloride, 5mM BME, 0.01M Tris-HCl pH 8.3. Screen solution: PEG's II, drop G10, 0.1M Lithium chloride, 0.1M HEPES pH 7.5, 25% w/v PEG 6000, VAPOR DIFFUSION, SITTING DROP, temperature 295K |