Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3K5L

Crystal structure of E.coli Pol II-abasic DNA-dATP Lt(0, 3) ternary complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0008296molecular_function3'-5'-DNA exonuclease activity
A0009432biological_processSOS response
A0034061molecular_functionDNA polymerase activity
A0045004biological_processDNA replication proofreading
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues18
DetailsBINDING SITE FOR RESIDUE DTP A 914
ChainResidue
AASP419
ATYR500
ATHR546
AASP547
AHOH811
AMG1001
AMG1002
PDOC913
TDT801
TDG805
ATYR420
ALYS421
ASER422
ALEU423
ATYR424
AARG477
ALYS493
AASN497

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1001
ChainResidue
AASP419
ATYR420
AASP547
ADTP914

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1002
ChainResidue
AASP419
AASP547
ADTP914
PDOC913

Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YGDTDSTFV
ChainResidueDetails
ATYR543-VAL551

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon