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3JCR

3D structure determination of the human*U4/U6.U5* tri-snRNP complex

Functional Information from GO Data
ChainGOidnamespacecontents
20000244biological_processspliceosomal tri-snRNP complex assembly
20000398biological_processmRNA splicing, via spliceosome
20000932cellular_componentP-body
20003723molecular_functionRNA binding
20005515molecular_functionprotein binding
20005634cellular_componentnucleus
20005654cellular_componentnucleoplasm
20005681cellular_componentspliceosomal complex
20005688cellular_componentU6 snRNP
20005737cellular_componentcytoplasm
20005829cellular_componentcytosol
20006397biological_processmRNA processing
20006402biological_processmRNA catabolic process
20008380biological_processRNA splicing
20017070molecular_functionU6 snRNA binding
20031267molecular_functionsmall GTPase binding
20046540cellular_componentU4/U6 x U5 tri-snRNP complex
20071005cellular_componentU2-type precatalytic spliceosome
20071011cellular_componentprecatalytic spliceosome
20071013cellular_componentcatalytic step 2 spliceosome
20120115cellular_componentLsm2-8 complex
21990726cellular_componentLsm1-7-Pat1 complex
30000398biological_processmRNA splicing, via spliceosome
30000932cellular_componentP-body
30003723molecular_functionRNA binding
30005515molecular_functionprotein binding
30005634cellular_componentnucleus
30005654cellular_componentnucleoplasm
30005681cellular_componentspliceosomal complex
30005688cellular_componentU6 snRNP
30005829cellular_componentcytosol
30006397biological_processmRNA processing
30008380biological_processRNA splicing
30030629molecular_functionU6 snRNA 3'-end binding
30032991cellular_componentprotein-containing complex
30033962biological_processP-body assembly
30046540cellular_componentU4/U6 x U5 tri-snRNP complex
30071005cellular_componentU2-type precatalytic spliceosome
30071011cellular_componentprecatalytic spliceosome
30071013cellular_componentcatalytic step 2 spliceosome
30120115cellular_componentLsm2-8 complex
31990726cellular_componentLsm1-7-Pat1 complex
40000387biological_processspliceosomal snRNP assembly
40000398biological_processmRNA splicing, via spliceosome
40000932cellular_componentP-body
40000956biological_processnuclear-transcribed mRNA catabolic process
40003723molecular_functionRNA binding
40005515molecular_functionprotein binding
40005634cellular_componentnucleus
40005654cellular_componentnucleoplasm
40005681cellular_componentspliceosomal complex
40005688cellular_componentU6 snRNP
40005829cellular_componentcytosol
40006396biological_processRNA processing
40006397biological_processmRNA processing
40008380biological_processRNA splicing
40016020cellular_componentmembrane
40017070molecular_functionU6 snRNA binding
40032991cellular_componentprotein-containing complex
40033962biological_processP-body assembly
40042731molecular_functionPH domain binding
40046540cellular_componentU4/U6 x U5 tri-snRNP complex
40071005cellular_componentU2-type precatalytic spliceosome
40097526cellular_componentspliceosomal tri-snRNP complex
40120115cellular_componentLsm2-8 complex
50000398biological_processmRNA splicing, via spliceosome
50003723molecular_functionRNA binding
50005515molecular_functionprotein binding
50005634cellular_componentnucleus
50005654cellular_componentnucleoplasm
50005681cellular_componentspliceosomal complex
50005688cellular_componentU6 snRNP
50005737cellular_componentcytoplasm
50005829cellular_componentcytosol
50006397biological_processmRNA processing
50006402biological_processmRNA catabolic process
50008380biological_processRNA splicing
50009617biological_processresponse to bacterium
50046540cellular_componentU4/U6 x U5 tri-snRNP complex
50046982molecular_functionprotein heterodimerization activity
50071005cellular_componentU2-type precatalytic spliceosome
50120115cellular_componentLsm2-8 complex
51990726cellular_componentLsm1-7-Pat1 complex
60000398biological_processmRNA splicing, via spliceosome
60000932cellular_componentP-body
60003723molecular_functionRNA binding
60005515molecular_functionprotein binding
60005634cellular_componentnucleus
60005654cellular_componentnucleoplasm
60005681cellular_componentspliceosomal complex
60005688cellular_componentU6 snRNP
60005730cellular_componentnucleolus
60005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
60005737cellular_componentcytoplasm
60005829cellular_componentcytosol
60006364biological_processrRNA processing
60006397biological_processmRNA processing
60006402biological_processmRNA catabolic process
60008033biological_processtRNA processing
60008380biological_processRNA splicing
60030490biological_processmaturation of SSU-rRNA
60030532cellular_componentsmall nuclear ribonucleoprotein complex
60046540cellular_componentU4/U6 x U5 tri-snRNP complex
60046982molecular_functionprotein heterodimerization activity
60071005cellular_componentU2-type precatalytic spliceosome
60120114cellular_componentSm-like protein family complex
60120115cellular_componentLsm2-8 complex
70000398biological_processmRNA splicing, via spliceosome
70000956biological_processnuclear-transcribed mRNA catabolic process
70003723molecular_functionRNA binding
70005515molecular_functionprotein binding
70005634cellular_componentnucleus
70005654cellular_componentnucleoplasm
70005681cellular_componentspliceosomal complex
70005688cellular_componentU6 snRNP
70005689cellular_componentU12-type spliceosomal complex
70005829cellular_componentcytosol
70006397biological_processmRNA processing
70008380biological_processRNA splicing
70017070molecular_functionU6 snRNA binding
70046540cellular_componentU4/U6 x U5 tri-snRNP complex
70071004cellular_componentU2-type prespliceosome
70071005cellular_componentU2-type precatalytic spliceosome
70071013cellular_componentcatalytic step 2 spliceosome
70097526cellular_componentspliceosomal tri-snRNP complex
70120115cellular_componentLsm2-8 complex
71990726cellular_componentLsm1-7-Pat1 complex
80000398biological_processmRNA splicing, via spliceosome
80003723molecular_functionRNA binding
80003729molecular_functionmRNA binding
80005515molecular_functionprotein binding
80005634cellular_componentnucleus
80005654cellular_componentnucleoplasm
80005681cellular_componentspliceosomal complex
80005688cellular_componentU6 snRNP
80006397biological_processmRNA processing
80008380biological_processRNA splicing
80017070molecular_functionU6 snRNA binding
80046540cellular_componentU4/U6 x U5 tri-snRNP complex
80071005cellular_componentU2-type precatalytic spliceosome
80071011cellular_componentprecatalytic spliceosome
80120115cellular_componentLsm2-8 complex
A0000244biological_processspliceosomal tri-snRNP complex assembly
A0000375biological_processRNA splicing, via transesterification reactions
A0000398biological_processmRNA splicing, via spliceosome
A0003723molecular_functionRNA binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005681cellular_componentspliceosomal complex
A0005682cellular_componentU5 snRNP
A0006397biological_processmRNA processing
A0008233molecular_functionpeptidase activity
A0008237molecular_functionmetallopeptidase activity
A0008380biological_processRNA splicing
A0016020cellular_componentmembrane
A0016607cellular_componentnuclear speck
A0017070molecular_functionU6 snRNA binding
A0030532cellular_componentsmall nuclear ribonucleoprotein complex
A0030619molecular_functionU1 snRNA binding
A0030620molecular_functionU2 snRNA binding
A0030623molecular_functionU5 snRNA binding
A0046540cellular_componentU4/U6 x U5 tri-snRNP complex
A0070530molecular_functionK63-linked polyubiquitin modification-dependent protein binding
A0071005cellular_componentU2-type precatalytic spliceosome
A0071006cellular_componentU2-type catalytic step 1 spliceosome
A0071007cellular_componentU2-type catalytic step 2 spliceosome
A0071013cellular_componentcatalytic step 2 spliceosome
A0071222biological_processcellular response to lipopolysaccharide
A0071356biological_processcellular response to tumor necrosis factor
A0097157molecular_functionpre-mRNA intronic binding
A0140492molecular_functionmetal-dependent deubiquitinase activity
B0000398biological_processmRNA splicing, via spliceosome
B0003723molecular_functionRNA binding
B0003924molecular_functionGTPase activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005681cellular_componentspliceosomal complex
B0005829cellular_componentcytosol
B0006397biological_processmRNA processing
B0008380biological_processRNA splicing
B0015030cellular_componentCajal body
B0016020cellular_componentmembrane
B0016607cellular_componentnuclear speck
B0030623molecular_functionU5 snRNA binding
B0042220biological_processresponse to cocaine
B0043231cellular_componentintracellular membrane-bounded organelle
B0046540cellular_componentU4/U6 x U5 tri-snRNP complex
B0071005cellular_componentU2-type precatalytic spliceosome
B0071007cellular_componentU2-type catalytic step 2 spliceosome
B0071013cellular_componentcatalytic step 2 spliceosome
B0071466biological_processcellular response to xenobiotic stimulus
C0000354biological_processcis assembly of pre-catalytic spliceosome
C0000388biological_processspliceosome conformational change to release U4 (or U4atac) and U1 (or U11)
C0000398biological_processmRNA splicing, via spliceosome
C0001649biological_processosteoblast differentiation
C0003676molecular_functionnucleic acid binding
C0003723molecular_functionRNA binding
C0003724molecular_functionRNA helicase activity
C0004386molecular_functionhelicase activity
C0005515molecular_functionprotein binding
C0005524molecular_functionATP binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005681cellular_componentspliceosomal complex
C0005682cellular_componentU5 snRNP
C0006397biological_processmRNA processing
C0008380biological_processRNA splicing
C0016020cellular_componentmembrane
C0016787molecular_functionhydrolase activity
C0016887molecular_functionATP hydrolysis activity
C0042802molecular_functionidentical protein binding
C0046540cellular_componentU4/U6 x U5 tri-snRNP complex
C0071005cellular_componentU2-type precatalytic spliceosome
C0071006cellular_componentU2-type catalytic step 1 spliceosome
C0071013cellular_componentcatalytic step 2 spliceosome
D0000375biological_processRNA splicing, via transesterification reactions
D0000398biological_processmRNA splicing, via spliceosome
D0003723molecular_functionRNA binding
D0005515molecular_functionprotein binding
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005681cellular_componentspliceosomal complex
D0005682cellular_componentU5 snRNP
D0005732cellular_componentsno(s)RNA-containing ribonucleoprotein complex
D0005829cellular_componentcytosol
D0006396biological_processRNA processing
D0006397biological_processmRNA processing
D0008380biological_processRNA splicing
D0016607cellular_componentnuclear speck
D0046540cellular_componentU4/U6 x U5 tri-snRNP complex
D0071007cellular_componentU2-type catalytic step 2 spliceosome
D0071013cellular_componentcatalytic step 2 spliceosome
E0000245biological_processspliceosomal complex assembly
E0000375biological_processRNA splicing, via transesterification reactions
E0000398biological_processmRNA splicing, via spliceosome
E0005515molecular_functionprotein binding
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005681cellular_componentspliceosomal complex
E0005682cellular_componentU5 snRNP
E0005829cellular_componentcytosol
E0006397biological_processmRNA processing
E0008380biological_processRNA splicing
E0046540cellular_componentU4/U6 x U5 tri-snRNP complex
E0051301biological_processcell division
E0071005cellular_componentU2-type precatalytic spliceosome
F0000354biological_processcis assembly of pre-catalytic spliceosome
F0000375biological_processRNA splicing, via transesterification reactions
F0000398biological_processmRNA splicing, via spliceosome
F0000785cellular_componentchromatin
F0003676molecular_functionnucleic acid binding
F0003723molecular_functionRNA binding
F0003724molecular_functionRNA helicase activity
F0003729molecular_functionmRNA binding
F0004386molecular_functionhelicase activity
F0005515molecular_functionprotein binding
F0005524molecular_functionATP binding
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005681cellular_componentspliceosomal complex
F0005682cellular_componentU5 snRNP
F0005694cellular_componentchromosome
F0005730cellular_componentnucleolus
F0006397biological_processmRNA processing
F0008380biological_processRNA splicing
F0016787molecular_functionhydrolase activity
F0016887molecular_functionATP hydrolysis activity
F0046540cellular_componentU4/U6 x U5 tri-snRNP complex
F0062176biological_processR-loop processing
F0070062cellular_componentextracellular exosome
F0071013cellular_componentcatalytic step 2 spliceosome
G0000244biological_processspliceosomal tri-snRNP complex assembly
G0000245biological_processspliceosomal complex assembly
G0000375biological_processRNA splicing, via transesterification reactions
G0000398biological_processmRNA splicing, via spliceosome
G0003723molecular_functionRNA binding
G0005515molecular_functionprotein binding
G0005634cellular_componentnucleus
G0005654cellular_componentnucleoplasm
G0005681cellular_componentspliceosomal complex
G0005682cellular_componentU5 snRNP
G0006396biological_processRNA processing
G0006397biological_processmRNA processing
G0006403biological_processRNA localization
G0008380biological_processRNA splicing
G0016020cellular_componentmembrane
G0016607cellular_componentnuclear speck
G0030674molecular_functionprotein-macromolecule adaptor activity
G0042802molecular_functionidentical protein binding
G0043021molecular_functionribonucleoprotein complex binding
G0045944biological_processpositive regulation of transcription by RNA polymerase II
G0046540cellular_componentU4/U6 x U5 tri-snRNP complex
G0071005cellular_componentU2-type precatalytic spliceosome
G0071013cellular_componentcatalytic step 2 spliceosome
I0000398biological_processmRNA splicing, via spliceosome
I0000492biological_processbox C/D snoRNP assembly
I0001651cellular_componentdense fibrillar component
I0003723molecular_functionRNA binding
I0005515molecular_functionprotein binding
I0005634cellular_componentnucleus
I0005654cellular_componentnucleoplasm
I0005681cellular_componentspliceosomal complex
I0005690cellular_componentU4atac snRNP
I0005730cellular_componentnucleolus
I0006397biological_processmRNA processing
I0007338biological_processsingle fertilization
I0008380biological_processRNA splicing
I0030490biological_processmaturation of SSU-rRNA
I0030515molecular_functionsnoRNA binding
I0030621molecular_functionU4 snRNA binding
I0030622molecular_functionU4atac snRNA binding
I0031428cellular_componentbox C/D methylation guide snoRNP complex
I0032040cellular_componentsmall-subunit processome
I0032991cellular_componentprotein-containing complex
I0034511molecular_functionU3 snoRNA binding
I0034512molecular_functionbox C/D sno(s)RNA binding
I0042254biological_processribosome biogenesis
I0042274biological_processribosomal small subunit biogenesis
I0046540cellular_componentU4/U6 x U5 tri-snRNP complex
I0051117molecular_functionATPase binding
I0071005cellular_componentU2-type precatalytic spliceosome
I0071011cellular_componentprecatalytic spliceosome
I1990904cellular_componentribonucleoprotein complex
J0000244biological_processspliceosomal tri-snRNP complex assembly
J0000398biological_processmRNA splicing, via spliceosome
J0003723molecular_functionRNA binding
J0005515molecular_functionprotein binding
J0005634cellular_componentnucleus
J0005654cellular_componentnucleoplasm
J0005681cellular_componentspliceosomal complex
J0005684cellular_componentU2-type spliceosomal complex
J0005687cellular_componentU4 snRNP
J0005690cellular_componentU4atac snRNP
J0006397biological_processmRNA processing
J0008380biological_processRNA splicing
J0015030cellular_componentCajal body
J0016607cellular_componentnuclear speck
J0030621molecular_functionU4 snRNA binding
J0030622molecular_functionU4atac snRNA binding
J0030674molecular_functionprotein-macromolecule adaptor activity
J0042802molecular_functionidentical protein binding
J0043021molecular_functionribonucleoprotein complex binding
J0046540cellular_componentU4/U6 x U5 tri-snRNP complex
J0048254biological_processsnoRNA localization
J0070990molecular_functionsnRNP binding
J0071005cellular_componentU2-type precatalytic spliceosome
J0071011cellular_componentprecatalytic spliceosome
J0071166biological_processribonucleoprotein complex localization
J0071339cellular_componentMLL1 complex
J0097526cellular_componentspliceosomal tri-snRNP complex
K0000244biological_processspliceosomal tri-snRNP complex assembly
K0000375biological_processRNA splicing, via transesterification reactions
K0000398biological_processmRNA splicing, via spliceosome
K0003723molecular_functionRNA binding
K0005515molecular_functionprotein binding
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005681cellular_componentspliceosomal complex
K0005829cellular_componentcytosol
K0006397biological_processmRNA processing
K0008380biological_processRNA splicing
K0015030cellular_componentCajal body
K0016607cellular_componentnuclear speck
K0032991cellular_componentprotein-containing complex
K0042802molecular_functionidentical protein binding
K0046540cellular_componentU4/U6 x U5 tri-snRNP complex
K0071005cellular_componentU2-type precatalytic spliceosome
L0000375biological_processRNA splicing, via transesterification reactions
L0000398biological_processmRNA splicing, via spliceosome
L0005515molecular_functionprotein binding
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005681cellular_componentspliceosomal complex
L0006396biological_processRNA processing
L0006397biological_processmRNA processing
L0008380biological_processRNA splicing
L0015030cellular_componentCajal body
L0016607cellular_componentnuclear speck
L0017070molecular_functionU6 snRNA binding
L0030621molecular_functionU4 snRNA binding
L0046540cellular_componentU4/U6 x U5 tri-snRNP complex
L0071001cellular_componentU4/U6 snRNP
L0071005cellular_componentU2-type precatalytic spliceosome
L0097525cellular_componentspliceosomal snRNP complex
o0000387biological_processspliceosomal snRNP assembly
o0000398biological_processmRNA splicing, via spliceosome
o0003723molecular_functionRNA binding
o0005515molecular_functionprotein binding
o0005634cellular_componentnucleus
o0005654cellular_componentnucleoplasm
o0005681cellular_componentspliceosomal complex
o0005682cellular_componentU5 snRNP
o0005683cellular_componentU7 snRNP
o0005684cellular_componentU2-type spliceosomal complex
o0005685cellular_componentU1 snRNP
o0005686cellular_componentU2 snRNP
o0005687cellular_componentU4 snRNP
o0005689cellular_componentU12-type spliceosomal complex
o0005697cellular_componenttelomerase holoenzyme complex
o0005737cellular_componentcytoplasm
o0005829cellular_componentcytosol
o0006397biological_processmRNA processing
o0006479biological_processprotein methylation
o0008380biological_processRNA splicing
o0030532cellular_componentsmall nuclear ribonucleoprotein complex
o0034709cellular_componentmethylosome
o0034719cellular_componentSMN-Sm protein complex
o0036261biological_process7-methylguanosine cap hypermethylation
o0046540cellular_componentU4/U6 x U5 tri-snRNP complex
o0070034molecular_functiontelomerase RNA binding
o0070990molecular_functionsnRNP binding
o0071004cellular_componentU2-type prespliceosome
o0071005cellular_componentU2-type precatalytic spliceosome
o0071007cellular_componentU2-type catalytic step 2 spliceosome
o0071013cellular_componentcatalytic step 2 spliceosome
o0071204cellular_componenthistone pre-mRNA 3'end processing complex
o0071208molecular_functionhistone pre-mRNA DCP binding
o1903241biological_processU2-type prespliceosome assembly
o1990446molecular_functionU1 snRNP binding
o1990447molecular_functionU2 snRNP binding
O0000387biological_processspliceosomal snRNP assembly
O0000398biological_processmRNA splicing, via spliceosome
O0003723molecular_functionRNA binding
O0005515molecular_functionprotein binding
O0005634cellular_componentnucleus
O0005654cellular_componentnucleoplasm
O0005681cellular_componentspliceosomal complex
O0005682cellular_componentU5 snRNP
O0005683cellular_componentU7 snRNP
O0005684cellular_componentU2-type spliceosomal complex
O0005685cellular_componentU1 snRNP
O0005686cellular_componentU2 snRNP
O0005687cellular_componentU4 snRNP
O0005689cellular_componentU12-type spliceosomal complex
O0005697cellular_componenttelomerase holoenzyme complex
O0005737cellular_componentcytoplasm
O0005829cellular_componentcytosol
O0006397biological_processmRNA processing
O0006479biological_processprotein methylation
O0008380biological_processRNA splicing
O0030532cellular_componentsmall nuclear ribonucleoprotein complex
O0034709cellular_componentmethylosome
O0034719cellular_componentSMN-Sm protein complex
O0036261biological_process7-methylguanosine cap hypermethylation
O0046540cellular_componentU4/U6 x U5 tri-snRNP complex
O0070034molecular_functiontelomerase RNA binding
O0070990molecular_functionsnRNP binding
O0071004cellular_componentU2-type prespliceosome
O0071005cellular_componentU2-type precatalytic spliceosome
O0071007cellular_componentU2-type catalytic step 2 spliceosome
O0071013cellular_componentcatalytic step 2 spliceosome
O0071204cellular_componenthistone pre-mRNA 3'end processing complex
O0071208molecular_functionhistone pre-mRNA DCP binding
O1903241biological_processU2-type prespliceosome assembly
O1990446molecular_functionU1 snRNP binding
O1990447molecular_functionU2 snRNP binding
p0000243cellular_componentcommitment complex
p0000245biological_processspliceosomal complex assembly
p0000387biological_processspliceosomal snRNP assembly
p0000398biological_processmRNA splicing, via spliceosome
p0003723molecular_functionRNA binding
p0005515molecular_functionprotein binding
p0005634cellular_componentnucleus
p0005654cellular_componentnucleoplasm
p0005681cellular_componentspliceosomal complex
p0005682cellular_componentU5 snRNP
p0005684cellular_componentU2-type spliceosomal complex
p0005685cellular_componentU1 snRNP
p0005686cellular_componentU2 snRNP
p0005687cellular_componentU4 snRNP
p0005689cellular_componentU12-type spliceosomal complex
p0005737cellular_componentcytoplasm
p0005829cellular_componentcytosol
p0006396biological_processRNA processing
p0006397biological_processmRNA processing
p0008380biological_processRNA splicing
p0030532cellular_componentsmall nuclear ribonucleoprotein complex
p0034709cellular_componentmethylosome
p0034715cellular_componentpICln-Sm protein complex
p0034719cellular_componentSMN-Sm protein complex
p0036261biological_process7-methylguanosine cap hypermethylation
p0046540cellular_componentU4/U6 x U5 tri-snRNP complex
p0071005cellular_componentU2-type precatalytic spliceosome
p0071007cellular_componentU2-type catalytic step 2 spliceosome
p0071011cellular_componentprecatalytic spliceosome
p0071013cellular_componentcatalytic step 2 spliceosome
p0097526cellular_componentspliceosomal tri-snRNP complex
p1903241biological_processU2-type prespliceosome assembly
P0000243cellular_componentcommitment complex
P0000245biological_processspliceosomal complex assembly
P0000387biological_processspliceosomal snRNP assembly
P0000398biological_processmRNA splicing, via spliceosome
P0003723molecular_functionRNA binding
P0005515molecular_functionprotein binding
P0005634cellular_componentnucleus
P0005654cellular_componentnucleoplasm
P0005681cellular_componentspliceosomal complex
P0005682cellular_componentU5 snRNP
P0005684cellular_componentU2-type spliceosomal complex
P0005685cellular_componentU1 snRNP
P0005686cellular_componentU2 snRNP
P0005687cellular_componentU4 snRNP
P0005689cellular_componentU12-type spliceosomal complex
P0005737cellular_componentcytoplasm
P0005829cellular_componentcytosol
P0006396biological_processRNA processing
P0006397biological_processmRNA processing
P0008380biological_processRNA splicing
P0030532cellular_componentsmall nuclear ribonucleoprotein complex
P0034709cellular_componentmethylosome
P0034715cellular_componentpICln-Sm protein complex
P0034719cellular_componentSMN-Sm protein complex
P0036261biological_process7-methylguanosine cap hypermethylation
P0046540cellular_componentU4/U6 x U5 tri-snRNP complex
P0071005cellular_componentU2-type precatalytic spliceosome
P0071007cellular_componentU2-type catalytic step 2 spliceosome
P0071011cellular_componentprecatalytic spliceosome
P0071013cellular_componentcatalytic step 2 spliceosome
P0097526cellular_componentspliceosomal tri-snRNP complex
P1903241biological_processU2-type prespliceosome assembly
q0000245biological_processspliceosomal complex assembly
q0000387biological_processspliceosomal snRNP assembly
q0000398biological_processmRNA splicing, via spliceosome
q0003723molecular_functionRNA binding
q0005515molecular_functionprotein binding
q0005634cellular_componentnucleus
q0005654cellular_componentnucleoplasm
q0005681cellular_componentspliceosomal complex
q0005682cellular_componentU5 snRNP
q0005684cellular_componentU2-type spliceosomal complex
q0005685cellular_componentU1 snRNP
q0005686cellular_componentU2 snRNP
q0005687cellular_componentU4 snRNP
q0005689cellular_componentU12-type spliceosomal complex
q0005737cellular_componentcytoplasm
q0005829cellular_componentcytosol
q0006397biological_processmRNA processing
q0008380biological_processRNA splicing
q0030532cellular_componentsmall nuclear ribonucleoprotein complex
q0034709cellular_componentmethylosome
q0034715cellular_componentpICln-Sm protein complex
q0034719cellular_componentSMN-Sm protein complex
q0036261biological_process7-methylguanosine cap hypermethylation
q0046540cellular_componentU4/U6 x U5 tri-snRNP complex
q0070062cellular_componentextracellular exosome
q0071005cellular_componentU2-type precatalytic spliceosome
q0071007cellular_componentU2-type catalytic step 2 spliceosome
q0071011cellular_componentprecatalytic spliceosome
q0071013cellular_componentcatalytic step 2 spliceosome
q1903241biological_processU2-type prespliceosome assembly
Q0000245biological_processspliceosomal complex assembly
Q0000387biological_processspliceosomal snRNP assembly
Q0000398biological_processmRNA splicing, via spliceosome
Q0003723molecular_functionRNA binding
Q0005515molecular_functionprotein binding
Q0005634cellular_componentnucleus
Q0005654cellular_componentnucleoplasm
Q0005681cellular_componentspliceosomal complex
Q0005682cellular_componentU5 snRNP
Q0005684cellular_componentU2-type spliceosomal complex
Q0005685cellular_componentU1 snRNP
Q0005686cellular_componentU2 snRNP
Q0005687cellular_componentU4 snRNP
Q0005689cellular_componentU12-type spliceosomal complex
Q0005737cellular_componentcytoplasm
Q0005829cellular_componentcytosol
Q0006397biological_processmRNA processing
Q0008380biological_processRNA splicing
Q0030532cellular_componentsmall nuclear ribonucleoprotein complex
Q0034709cellular_componentmethylosome
Q0034715cellular_componentpICln-Sm protein complex
Q0034719cellular_componentSMN-Sm protein complex
Q0036261biological_process7-methylguanosine cap hypermethylation
Q0046540cellular_componentU4/U6 x U5 tri-snRNP complex
Q0070062cellular_componentextracellular exosome
Q0071005cellular_componentU2-type precatalytic spliceosome
Q0071007cellular_componentU2-type catalytic step 2 spliceosome
Q0071011cellular_componentprecatalytic spliceosome
Q0071013cellular_componentcatalytic step 2 spliceosome
Q1903241biological_processU2-type prespliceosome assembly
r0000243cellular_componentcommitment complex
r0000387biological_processspliceosomal snRNP assembly
r0000398biological_processmRNA splicing, via spliceosome
r0003723molecular_functionRNA binding
r0005515molecular_functionprotein binding
r0005634cellular_componentnucleus
r0005654cellular_componentnucleoplasm
r0005681cellular_componentspliceosomal complex
r0005682cellular_componentU5 snRNP
r0005683cellular_componentU7 snRNP
r0005684cellular_componentU2-type spliceosomal complex
r0005685cellular_componentU1 snRNP
r0005686cellular_componentU2 snRNP
r0005687cellular_componentU4 snRNP
r0005689cellular_componentU12-type spliceosomal complex
r0005697cellular_componenttelomerase holoenzyme complex
r0005737cellular_componentcytoplasm
r0005829cellular_componentcytosol
r0006396biological_processRNA processing
r0006397biological_processmRNA processing
r0006479biological_processprotein methylation
r0008380biological_processRNA splicing
r0016604cellular_componentnuclear body
r0019899molecular_functionenzyme binding
r0030532cellular_componentsmall nuclear ribonucleoprotein complex
r0034709cellular_componentmethylosome
r0034715cellular_componentpICln-Sm protein complex
r0034719cellular_componentSMN-Sm protein complex
r0036261biological_process7-methylguanosine cap hypermethylation
r0046540cellular_componentU4/U6 x U5 tri-snRNP complex
r0070034molecular_functiontelomerase RNA binding
r0071005cellular_componentU2-type precatalytic spliceosome
r0071007cellular_componentU2-type catalytic step 2 spliceosome
r0071011cellular_componentprecatalytic spliceosome
r0071013cellular_componentcatalytic step 2 spliceosome
r0071208molecular_functionhistone pre-mRNA DCP binding
r0071209molecular_functionU7 snRNA binding
r0097526cellular_componentspliceosomal tri-snRNP complex
r1903241biological_processU2-type prespliceosome assembly
r1990446molecular_functionU1 snRNP binding
R0000243cellular_componentcommitment complex
R0000387biological_processspliceosomal snRNP assembly
R0000398biological_processmRNA splicing, via spliceosome
R0003723molecular_functionRNA binding
R0005515molecular_functionprotein binding
R0005634cellular_componentnucleus
R0005654cellular_componentnucleoplasm
R0005681cellular_componentspliceosomal complex
R0005682cellular_componentU5 snRNP
R0005683cellular_componentU7 snRNP
R0005684cellular_componentU2-type spliceosomal complex
R0005685cellular_componentU1 snRNP
R0005686cellular_componentU2 snRNP
R0005687cellular_componentU4 snRNP
R0005689cellular_componentU12-type spliceosomal complex
R0005697cellular_componenttelomerase holoenzyme complex
R0005737cellular_componentcytoplasm
R0005829cellular_componentcytosol
R0006396biological_processRNA processing
R0006397biological_processmRNA processing
R0006479biological_processprotein methylation
R0008380biological_processRNA splicing
R0016604cellular_componentnuclear body
R0019899molecular_functionenzyme binding
R0030532cellular_componentsmall nuclear ribonucleoprotein complex
R0034709cellular_componentmethylosome
R0034715cellular_componentpICln-Sm protein complex
R0034719cellular_componentSMN-Sm protein complex
R0036261biological_process7-methylguanosine cap hypermethylation
R0046540cellular_componentU4/U6 x U5 tri-snRNP complex
R0070034molecular_functiontelomerase RNA binding
R0071005cellular_componentU2-type precatalytic spliceosome
R0071007cellular_componentU2-type catalytic step 2 spliceosome
R0071011cellular_componentprecatalytic spliceosome
R0071013cellular_componentcatalytic step 2 spliceosome
R0071208molecular_functionhistone pre-mRNA DCP binding
R0071209molecular_functionU7 snRNA binding
R0097526cellular_componentspliceosomal tri-snRNP complex
R1903241biological_processU2-type prespliceosome assembly
R1990446molecular_functionU1 snRNP binding
s0000245biological_processspliceosomal complex assembly
s0000387biological_processspliceosomal snRNP assembly
s0000398biological_processmRNA splicing, via spliceosome
s0003723molecular_functionRNA binding
s0005515molecular_functionprotein binding
s0005634cellular_componentnucleus
s0005654cellular_componentnucleoplasm
s0005681cellular_componentspliceosomal complex
s0005682cellular_componentU5 snRNP
s0005683cellular_componentU7 snRNP
s0005684cellular_componentU2-type spliceosomal complex
s0005685cellular_componentU1 snRNP
s0005686cellular_componentU2 snRNP
s0005687cellular_componentU4 snRNP
s0005689cellular_componentU12-type spliceosomal complex
s0005697cellular_componenttelomerase holoenzyme complex
s0005737cellular_componentcytoplasm
s0005829cellular_componentcytosol
s0006397biological_processmRNA processing
s0008380biological_processRNA splicing
s0030532cellular_componentsmall nuclear ribonucleoprotein complex
s0034709cellular_componentmethylosome
s0034715cellular_componentpICln-Sm protein complex
s0034719cellular_componentSMN-Sm protein complex
s0036261biological_process7-methylguanosine cap hypermethylation
s0046540cellular_componentU4/U6 x U5 tri-snRNP complex
s0071005cellular_componentU2-type precatalytic spliceosome
s0071007cellular_componentU2-type catalytic step 2 spliceosome
s0071011cellular_componentprecatalytic spliceosome
s0071013cellular_componentcatalytic step 2 spliceosome
s1903241biological_processU2-type prespliceosome assembly
S0000245biological_processspliceosomal complex assembly
S0000387biological_processspliceosomal snRNP assembly
S0000398biological_processmRNA splicing, via spliceosome
S0003723molecular_functionRNA binding
S0005515molecular_functionprotein binding
S0005634cellular_componentnucleus
S0005654cellular_componentnucleoplasm
S0005681cellular_componentspliceosomal complex
S0005682cellular_componentU5 snRNP
S0005683cellular_componentU7 snRNP
S0005684cellular_componentU2-type spliceosomal complex
S0005685cellular_componentU1 snRNP
S0005686cellular_componentU2 snRNP
S0005687cellular_componentU4 snRNP
S0005689cellular_componentU12-type spliceosomal complex
S0005697cellular_componenttelomerase holoenzyme complex
S0005737cellular_componentcytoplasm
S0005829cellular_componentcytosol
S0006397biological_processmRNA processing
S0008380biological_processRNA splicing
S0030532cellular_componentsmall nuclear ribonucleoprotein complex
S0034709cellular_componentmethylosome
S0034715cellular_componentpICln-Sm protein complex
S0034719cellular_componentSMN-Sm protein complex
S0036261biological_process7-methylguanosine cap hypermethylation
S0046540cellular_componentU4/U6 x U5 tri-snRNP complex
S0071005cellular_componentU2-type precatalytic spliceosome
S0071007cellular_componentU2-type catalytic step 2 spliceosome
S0071011cellular_componentprecatalytic spliceosome
S0071013cellular_componentcatalytic step 2 spliceosome
S1903241biological_processU2-type prespliceosome assembly
t0000387biological_processspliceosomal snRNP assembly
t0000398biological_processmRNA splicing, via spliceosome
t0003723molecular_functionRNA binding
t0005515molecular_functionprotein binding
t0005634cellular_componentnucleus
t0005654cellular_componentnucleoplasm
t0005681cellular_componentspliceosomal complex
t0005682cellular_componentU5 snRNP
t0005683cellular_componentU7 snRNP
t0005684cellular_componentU2-type spliceosomal complex
t0005685cellular_componentU1 snRNP
t0005686cellular_componentU2 snRNP
t0005687cellular_componentU4 snRNP
t0005689cellular_componentU12-type spliceosomal complex
t0005737cellular_componentcytoplasm
t0005829cellular_componentcytosol
t0006397biological_processmRNA processing
t0008380biological_processRNA splicing
t0030532cellular_componentsmall nuclear ribonucleoprotein complex
t0034709cellular_componentmethylosome
t0034715cellular_componentpICln-Sm protein complex
t0034719cellular_componentSMN-Sm protein complex
t0036261biological_process7-methylguanosine cap hypermethylation
t0046540cellular_componentU4/U6 x U5 tri-snRNP complex
t0071005cellular_componentU2-type precatalytic spliceosome
t0071007cellular_componentU2-type catalytic step 2 spliceosome
t0071013cellular_componentcatalytic step 2 spliceosome
t0120114cellular_componentSm-like protein family complex
t1903241biological_processU2-type prespliceosome assembly
T0000387biological_processspliceosomal snRNP assembly
T0000398biological_processmRNA splicing, via spliceosome
T0003723molecular_functionRNA binding
T0005515molecular_functionprotein binding
T0005634cellular_componentnucleus
T0005654cellular_componentnucleoplasm
T0005681cellular_componentspliceosomal complex
T0005682cellular_componentU5 snRNP
T0005683cellular_componentU7 snRNP
T0005684cellular_componentU2-type spliceosomal complex
T0005685cellular_componentU1 snRNP
T0005686cellular_componentU2 snRNP
T0005687cellular_componentU4 snRNP
T0005689cellular_componentU12-type spliceosomal complex
T0005737cellular_componentcytoplasm
T0005829cellular_componentcytosol
T0006397biological_processmRNA processing
T0008380biological_processRNA splicing
T0030532cellular_componentsmall nuclear ribonucleoprotein complex
T0034709cellular_componentmethylosome
T0034715cellular_componentpICln-Sm protein complex
T0034719cellular_componentSMN-Sm protein complex
T0036261biological_process7-methylguanosine cap hypermethylation
T0046540cellular_componentU4/U6 x U5 tri-snRNP complex
T0071005cellular_componentU2-type precatalytic spliceosome
T0071007cellular_componentU2-type catalytic step 2 spliceosome
T0071013cellular_componentcatalytic step 2 spliceosome
T0120114cellular_componentSm-like protein family complex
T1903241biological_processU2-type prespliceosome assembly
u0000245biological_processspliceosomal complex assembly
u0000387biological_processspliceosomal snRNP assembly
u0000398biological_processmRNA splicing, via spliceosome
u0003723molecular_functionRNA binding
u0005515molecular_functionprotein binding
u0005634cellular_componentnucleus
u0005654cellular_componentnucleoplasm
u0005681cellular_componentspliceosomal complex
u0005682cellular_componentU5 snRNP
u0005683cellular_componentU7 snRNP
u0005684cellular_componentU2-type spliceosomal complex
u0005685cellular_componentU1 snRNP
u0005686cellular_componentU2 snRNP
u0005687cellular_componentU4 snRNP
u0005689cellular_componentU12-type spliceosomal complex
u0005737cellular_componentcytoplasm
u0005829cellular_componentcytosol
u0006397biological_processmRNA processing
u0008380biological_processRNA splicing
u0030532cellular_componentsmall nuclear ribonucleoprotein complex
u0034709cellular_componentmethylosome
u0034719cellular_componentSMN-Sm protein complex
u0036261biological_process7-methylguanosine cap hypermethylation
u0043186cellular_componentP granule
u0046540cellular_componentU4/U6 x U5 tri-snRNP complex
u0071004cellular_componentU2-type prespliceosome
u0071005cellular_componentU2-type precatalytic spliceosome
u0071007cellular_componentU2-type catalytic step 2 spliceosome
u0071011cellular_componentprecatalytic spliceosome
u0071013cellular_componentcatalytic step 2 spliceosome
u0097526cellular_componentspliceosomal tri-snRNP complex
u1903241biological_processU2-type prespliceosome assembly
U0000245biological_processspliceosomal complex assembly
U0000387biological_processspliceosomal snRNP assembly
U0000398biological_processmRNA splicing, via spliceosome
U0003723molecular_functionRNA binding
U0005515molecular_functionprotein binding
U0005634cellular_componentnucleus
U0005654cellular_componentnucleoplasm
U0005681cellular_componentspliceosomal complex
U0005682cellular_componentU5 snRNP
U0005683cellular_componentU7 snRNP
U0005684cellular_componentU2-type spliceosomal complex
U0005685cellular_componentU1 snRNP
U0005686cellular_componentU2 snRNP
U0005687cellular_componentU4 snRNP
U0005689cellular_componentU12-type spliceosomal complex
U0005737cellular_componentcytoplasm
U0005829cellular_componentcytosol
U0006397biological_processmRNA processing
U0008380biological_processRNA splicing
U0030532cellular_componentsmall nuclear ribonucleoprotein complex
U0034709cellular_componentmethylosome
U0034719cellular_componentSMN-Sm protein complex
U0036261biological_process7-methylguanosine cap hypermethylation
U0043186cellular_componentP granule
U0046540cellular_componentU4/U6 x U5 tri-snRNP complex
U0071004cellular_componentU2-type prespliceosome
U0071005cellular_componentU2-type precatalytic spliceosome
U0071007cellular_componentU2-type catalytic step 2 spliceosome
U0071011cellular_componentprecatalytic spliceosome
U0071013cellular_componentcatalytic step 2 spliceosome
U0097526cellular_componentspliceosomal tri-snRNP complex
U1903241biological_processU2-type prespliceosome assembly
V0000245biological_processspliceosomal complex assembly
V0000398biological_processmRNA splicing, via spliceosome
V0004843molecular_functioncysteine-type deubiquitinase activity
V0005515molecular_functionprotein binding
V0005634cellular_componentnucleus
V0005654cellular_componentnucleoplasm
V0005681cellular_componentspliceosomal complex
V0006397biological_processmRNA processing
V0008270molecular_functionzinc ion binding
V0008380biological_processRNA splicing
V0016579biological_processprotein deubiquitination
V0016787molecular_functionhydrolase activity
V0046540cellular_componentU4/U6 x U5 tri-snRNP complex
V0046872molecular_functionmetal ion binding
V0051301biological_processcell division
Functional Information from PROSITE/UniProt
site_idPS00039
Number of Residues9
DetailsDEAD_ATP_HELICASE DEAD-box subfamily ATP-dependent helicases signature. VLDEADRmI
ChainResidueDetails
FVAL547-ILE555

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. TVrvARVmWHPS
ChainResidueDetails
LTHR323-SER334

site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LASAgfDrLILLWNV
ChainResidueDetails
DLEU81-VAL95
DLEU124-SER138
DVAL167-ILE181
DILE208-LEU222
DILE300-THR314
LLEU338-LEU352
LILE422-LEU436

site_idPS01082
Number of Residues18
DetailsRIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CedknVPYvfVrSKqaLG
ChainResidueDetails
ICYS73-GLY90

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
LPRO28
ILYS86
pLYS86
oARG112

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00502
ChainResidueDetails
VCYS136
VCYS139
VHIS155
VHIS161

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
VSER46
qTHR12

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
ChainResidueDetails
VSER82
FSER109
KLYS244
KLYS252
qLYS8

site_idSWS_FT_FI5
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
VLYS51
CTHR1428
FLYS811

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
JSER432
JSER439

site_idSWS_FT_FI7
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q8CCF0
ChainResidueDetails
JLYS438

site_idSWS_FT_FI8
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:23186163
ChainResidueDetails
JTHR440

site_idSWS_FT_FI9
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648
ChainResidueDetails
JSER450

site_idSWS_FT_FI10
Number of Residues1
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
ChainResidueDetails
JTHR455

site_idSWS_FT_FI11
Number of Residues3
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
JLYS471
CSER2135
JLYS478

site_idSWS_FT_FI12
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
CLYS46

224572

PDB entries from 2024-09-04

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