3JAM
CryoEM structure of 40S-eIF1A-eIF1 complex from yeast
Functional Information from GO Data
Chain | GOid | namespace | contents |
a | 0003729 | molecular_function | mRNA binding |
a | 0003735 | molecular_function | structural constituent of ribosome |
a | 0005840 | cellular_component | ribosome |
a | 0006412 | biological_process | translation |
a | 0022627 | cellular_component | cytosolic small ribosomal subunit |
a | 1990904 | cellular_component | ribonucleoprotein complex |
A | 0000028 | biological_process | ribosomal small subunit assembly |
A | 0002181 | biological_process | cytoplasmic translation |
A | 0003735 | molecular_function | structural constituent of ribosome |
A | 0005737 | cellular_component | cytoplasm |
A | 0005840 | cellular_component | ribosome |
A | 0006412 | biological_process | translation |
A | 0015935 | cellular_component | small ribosomal subunit |
A | 0022627 | cellular_component | cytosolic small ribosomal subunit |
A | 0030686 | cellular_component | 90S preribosome |
A | 1990904 | cellular_component | ribonucleoprotein complex |
b | 0000028 | biological_process | ribosomal small subunit assembly |
b | 0003723 | molecular_function | RNA binding |
b | 0003735 | molecular_function | structural constituent of ribosome |
b | 0005840 | cellular_component | ribosome |
b | 0006412 | biological_process | translation |
b | 0022627 | cellular_component | cytosolic small ribosomal subunit |
b | 0046872 | molecular_function | metal ion binding |
b | 1990904 | cellular_component | ribonucleoprotein complex |
B | 0003735 | molecular_function | structural constituent of ribosome |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0005840 | cellular_component | ribosome |
B | 0006412 | biological_process | translation |
B | 0022627 | cellular_component | cytosolic small ribosomal subunit |
B | 1990904 | cellular_component | ribonucleoprotein complex |
c | 0000028 | biological_process | ribosomal small subunit assembly |
c | 0003735 | molecular_function | structural constituent of ribosome |
c | 0005840 | cellular_component | ribosome |
c | 0006412 | biological_process | translation |
c | 0022627 | cellular_component | cytosolic small ribosomal subunit |
c | 0030490 | biological_process | maturation of SSU-rRNA |
c | 1990904 | cellular_component | ribonucleoprotein complex |
C | 0003723 | molecular_function | RNA binding |
C | 0003735 | molecular_function | structural constituent of ribosome |
C | 0005840 | cellular_component | ribosome |
C | 0006412 | biological_process | translation |
C | 0015935 | cellular_component | small ribosomal subunit |
C | 0022627 | cellular_component | cytosolic small ribosomal subunit |
C | 1990904 | cellular_component | ribonucleoprotein complex |
d | 0003735 | molecular_function | structural constituent of ribosome |
d | 0005840 | cellular_component | ribosome |
d | 0006412 | biological_process | translation |
d | 0008270 | molecular_function | zinc ion binding |
d | 0022627 | cellular_component | cytosolic small ribosomal subunit |
d | 1990904 | cellular_component | ribonucleoprotein complex |
D | 0003723 | molecular_function | RNA binding |
D | 0003735 | molecular_function | structural constituent of ribosome |
D | 0005634 | cellular_component | nucleus |
D | 0005840 | cellular_component | ribosome |
D | 0006412 | biological_process | translation |
D | 0015935 | cellular_component | small ribosomal subunit |
D | 0022626 | cellular_component | cytosolic ribosome |
D | 0022627 | cellular_component | cytosolic small ribosomal subunit |
D | 1990904 | cellular_component | ribonucleoprotein complex |
e | 0003735 | molecular_function | structural constituent of ribosome |
e | 0005829 | cellular_component | cytosol |
e | 0005840 | cellular_component | ribosome |
e | 0006412 | biological_process | translation |
e | 0022627 | cellular_component | cytosolic small ribosomal subunit |
e | 1990904 | cellular_component | ribonucleoprotein complex |
E | 0003723 | molecular_function | RNA binding |
E | 0003735 | molecular_function | structural constituent of ribosome |
E | 0005840 | cellular_component | ribosome |
E | 0006412 | biological_process | translation |
E | 0019843 | molecular_function | rRNA binding |
E | 0022627 | cellular_component | cytosolic small ribosomal subunit |
E | 0032991 | cellular_component | protein-containing complex |
E | 0043229 | cellular_component | intracellular organelle |
E | 1990904 | cellular_component | ribonucleoprotein complex |
f | 0003735 | molecular_function | structural constituent of ribosome |
f | 0005634 | cellular_component | nucleus |
f | 0005737 | cellular_component | cytoplasm |
f | 0005840 | cellular_component | ribosome |
f | 0006412 | biological_process | translation |
f | 0016567 | biological_process | protein ubiquitination |
f | 0019941 | biological_process | modification-dependent protein catabolic process |
f | 0031386 | molecular_function | protein tag activity |
f | 0031625 | molecular_function | ubiquitin protein ligase binding |
f | 0046872 | molecular_function | metal ion binding |
f | 1990904 | cellular_component | ribonucleoprotein complex |
F | 0000028 | biological_process | ribosomal small subunit assembly |
F | 0003723 | molecular_function | RNA binding |
F | 0003729 | molecular_function | mRNA binding |
F | 0003735 | molecular_function | structural constituent of ribosome |
F | 0005840 | cellular_component | ribosome |
F | 0006412 | biological_process | translation |
F | 0015935 | cellular_component | small ribosomal subunit |
F | 0019843 | molecular_function | rRNA binding |
F | 0022627 | cellular_component | cytosolic small ribosomal subunit |
F | 1990904 | cellular_component | ribonucleoprotein complex |
g | 0001934 | biological_process | positive regulation of protein phosphorylation |
g | 0005080 | molecular_function | protein kinase C binding |
g | 0005634 | cellular_component | nucleus |
g | 0005829 | cellular_component | cytosol |
g | 0006417 | biological_process | regulation of translation |
g | 0043022 | molecular_function | ribosome binding |
g | 0045182 | molecular_function | translation regulator activity |
g | 0072344 | biological_process | rescue of stalled ribosome |
G | 0003735 | molecular_function | structural constituent of ribosome |
G | 0005840 | cellular_component | ribosome |
G | 0006412 | biological_process | translation |
G | 1990904 | cellular_component | ribonucleoprotein complex |
h | 0002181 | biological_process | cytoplasmic translation |
h | 0003735 | molecular_function | structural constituent of ribosome |
h | 0005737 | cellular_component | cytoplasm |
h | 0005829 | cellular_component | cytosol |
h | 0005840 | cellular_component | ribosome |
h | 0006412 | biological_process | translation |
h | 0022625 | cellular_component | cytosolic large ribosomal subunit |
h | 1990904 | cellular_component | ribonucleoprotein complex |
H | 0003735 | molecular_function | structural constituent of ribosome |
H | 0005840 | cellular_component | ribosome |
H | 0006364 | biological_process | rRNA processing |
H | 0006412 | biological_process | translation |
H | 0022627 | cellular_component | cytosolic small ribosomal subunit |
H | 0030686 | cellular_component | 90S preribosome |
H | 0032040 | cellular_component | small-subunit processome |
H | 0042274 | biological_process | ribosomal small subunit biogenesis |
H | 1990904 | cellular_component | ribonucleoprotein complex |
i | 0001677 | biological_process | formation of translation initiation ternary complex |
i | 0001731 | biological_process | formation of translation preinitiation complex |
i | 0001732 | biological_process | formation of cytoplasmic translation initiation complex |
i | 0002188 | biological_process | translation reinitiation |
i | 0003723 | molecular_function | RNA binding |
i | 0003725 | molecular_function | double-stranded RNA binding |
i | 0003743 | molecular_function | translation initiation factor activity |
i | 0005515 | molecular_function | protein binding |
i | 0005737 | cellular_component | cytoplasm |
i | 0006412 | biological_process | translation |
i | 0006413 | biological_process | translational initiation |
i | 0010494 | cellular_component | cytoplasmic stress granule |
i | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
i | 0019901 | molecular_function | protein kinase binding |
i | 0031369 | molecular_function | translation initiation factor binding |
i | 0033290 | cellular_component | eukaryotic 48S preinitiation complex |
i | 0043024 | molecular_function | ribosomal small subunit binding |
I | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
I | 0003735 | molecular_function | structural constituent of ribosome |
I | 0005840 | cellular_component | ribosome |
I | 0006412 | biological_process | translation |
I | 0022627 | cellular_component | cytosolic small ribosomal subunit |
I | 1990904 | cellular_component | ribonucleoprotein complex |
j | 0001731 | biological_process | formation of translation preinitiation complex |
j | 0003723 | molecular_function | RNA binding |
j | 0003743 | molecular_function | translation initiation factor activity |
j | 0005515 | molecular_function | protein binding |
j | 0006412 | biological_process | translation |
j | 0006413 | biological_process | translational initiation |
j | 0006417 | biological_process | regulation of translation |
j | 0006450 | biological_process | regulation of translational fidelity |
j | 0016282 | cellular_component | eukaryotic 43S preinitiation complex |
j | 0031369 | molecular_function | translation initiation factor binding |
j | 0043024 | molecular_function | ribosomal small subunit binding |
j | 0043614 | cellular_component | multi-eIF complex |
j | 1990145 | biological_process | maintenance of translational fidelity |
J | 0003723 | molecular_function | RNA binding |
J | 0003735 | molecular_function | structural constituent of ribosome |
J | 0005840 | cellular_component | ribosome |
J | 0006412 | biological_process | translation |
J | 0015935 | cellular_component | small ribosomal subunit |
J | 0019843 | molecular_function | rRNA binding |
J | 0022627 | cellular_component | cytosolic small ribosomal subunit |
J | 0042274 | biological_process | ribosomal small subunit biogenesis |
J | 0043226 | cellular_component | organelle |
J | 1990904 | cellular_component | ribonucleoprotein complex |
K | 0003723 | molecular_function | RNA binding |
K | 0003735 | molecular_function | structural constituent of ribosome |
K | 0005737 | cellular_component | cytoplasm |
K | 0022627 | cellular_component | cytosolic small ribosomal subunit |
L | 0003735 | molecular_function | structural constituent of ribosome |
L | 0005840 | cellular_component | ribosome |
L | 0006412 | biological_process | translation |
L | 0022627 | cellular_component | cytosolic small ribosomal subunit |
L | 1990904 | cellular_component | ribonucleoprotein complex |
M | 0003735 | molecular_function | structural constituent of ribosome |
M | 0005840 | cellular_component | ribosome |
M | 0006412 | biological_process | translation |
M | 0022627 | cellular_component | cytosolic small ribosomal subunit |
M | 1990904 | cellular_component | ribonucleoprotein complex |
N | 0003735 | molecular_function | structural constituent of ribosome |
N | 0005730 | cellular_component | nucleolus |
N | 0005840 | cellular_component | ribosome |
N | 0006412 | biological_process | translation |
N | 0022627 | cellular_component | cytosolic small ribosomal subunit |
N | 0070181 | molecular_function | small ribosomal subunit rRNA binding |
N | 1990904 | cellular_component | ribonucleoprotein complex |
O | 0000028 | biological_process | ribosomal small subunit assembly |
O | 0003735 | molecular_function | structural constituent of ribosome |
O | 0005840 | cellular_component | ribosome |
O | 0006412 | biological_process | translation |
O | 0022627 | cellular_component | cytosolic small ribosomal subunit |
O | 1990904 | cellular_component | ribonucleoprotein complex |
P | 0000028 | biological_process | ribosomal small subunit assembly |
P | 0003723 | molecular_function | RNA binding |
P | 0003735 | molecular_function | structural constituent of ribosome |
P | 0005840 | cellular_component | ribosome |
P | 0006412 | biological_process | translation |
P | 0015935 | cellular_component | small ribosomal subunit |
P | 0022627 | cellular_component | cytosolic small ribosomal subunit |
P | 1990904 | cellular_component | ribonucleoprotein complex |
Q | 0000462 | biological_process | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Q | 0003723 | molecular_function | RNA binding |
Q | 0003735 | molecular_function | structural constituent of ribosome |
Q | 0005840 | cellular_component | ribosome |
Q | 0006412 | biological_process | translation |
Q | 0022627 | cellular_component | cytosolic small ribosomal subunit |
Q | 1990904 | cellular_component | ribonucleoprotein complex |
R | 0003735 | molecular_function | structural constituent of ribosome |
R | 0005829 | cellular_component | cytosol |
R | 0005840 | cellular_component | ribosome |
R | 0006412 | biological_process | translation |
R | 1990904 | cellular_component | ribonucleoprotein complex |
S | 0003676 | molecular_function | nucleic acid binding |
S | 0003723 | molecular_function | RNA binding |
S | 0003735 | molecular_function | structural constituent of ribosome |
S | 0005829 | cellular_component | cytosol |
S | 0005840 | cellular_component | ribosome |
S | 0006412 | biological_process | translation |
S | 0015935 | cellular_component | small ribosomal subunit |
S | 1990904 | cellular_component | ribonucleoprotein complex |
T | 0000028 | biological_process | ribosomal small subunit assembly |
T | 0003723 | molecular_function | RNA binding |
T | 0003735 | molecular_function | structural constituent of ribosome |
T | 0005840 | cellular_component | ribosome |
T | 0006412 | biological_process | translation |
T | 0022627 | cellular_component | cytosolic small ribosomal subunit |
T | 1990904 | cellular_component | ribonucleoprotein complex |
U | 0003735 | molecular_function | structural constituent of ribosome |
U | 0005840 | cellular_component | ribosome |
U | 0006412 | biological_process | translation |
U | 0015935 | cellular_component | small ribosomal subunit |
U | 0022627 | cellular_component | cytosolic small ribosomal subunit |
U | 1990904 | cellular_component | ribonucleoprotein complex |
V | 0000447 | biological_process | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
V | 0000461 | biological_process | endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
V | 0003735 | molecular_function | structural constituent of ribosome |
V | 0005737 | cellular_component | cytoplasm |
V | 0005840 | cellular_component | ribosome |
V | 0006364 | biological_process | rRNA processing |
V | 0006412 | biological_process | translation |
V | 0022627 | cellular_component | cytosolic small ribosomal subunit |
V | 1990904 | cellular_component | ribonucleoprotein complex |
W | 0003735 | molecular_function | structural constituent of ribosome |
W | 0005840 | cellular_component | ribosome |
W | 0006412 | biological_process | translation |
W | 1990904 | cellular_component | ribonucleoprotein complex |
X | 0003735 | molecular_function | structural constituent of ribosome |
X | 0005840 | cellular_component | ribosome |
X | 0006412 | biological_process | translation |
X | 0015935 | cellular_component | small ribosomal subunit |
X | 0022627 | cellular_component | cytosolic small ribosomal subunit |
X | 1990904 | cellular_component | ribonucleoprotein complex |
Y | 0003735 | molecular_function | structural constituent of ribosome |
Y | 0005840 | cellular_component | ribosome |
Y | 0006412 | biological_process | translation |
Y | 1990904 | cellular_component | ribonucleoprotein complex |
Z | 0003735 | molecular_function | structural constituent of ribosome |
Z | 0005840 | cellular_component | ribosome |
Z | 0022627 | cellular_component | cytosolic small ribosomal subunit |
Z | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1801 |
Chain | Residue |
2 | G361 |
site_id | AC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1802 |
Chain | Residue |
2 | G95 |
2 | G402 |
site_id | AC3 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1803 |
Chain | Residue |
2 | G551 |
2 | A554 |
2 | A555 |
site_id | AC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1804 |
Chain | Residue |
2 | A100 |
site_id | AC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1805 |
Chain | Residue |
2 | A1024 |
site_id | AC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1807 |
Chain | Residue |
2 | A424 |
2 | C49 |
site_id | AC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1809 |
Chain | Residue |
2 | G1329 |
site_id | AC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1811 |
Chain | Residue |
2 | A928 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG 2 1812 |
Chain | Residue |
2 | A1761 |
2 | G1765 |
2 | G1766 |
2 | U1768 |
2 | U1769 |
site_id | BC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1814 |
Chain | Residue |
2 | A386 |
2 | A400 |
site_id | BC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1815 |
Chain | Residue |
2 | G16 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1816 |
Chain | Residue |
2 | A377 |
2 | U378 |
site_id | BC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1817 |
Chain | Residue |
2 | A28 |
site_id | BC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1818 |
Chain | Residue |
2 | G370 |
2 | A604 |
2 | G606 |
site_id | BC6 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1819 |
Chain | Residue |
2 | U1003 |
site_id | BC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1820 |
Chain | Residue |
2 | C426 |
site_id | BC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1821 |
Chain | Residue |
2 | U44 |
2 | A47 |
site_id | BC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG 2 1822 |
Chain | Residue |
2 | U1759 |
2 | A1760 |
2 | A1761 |
2 | G1765 |
2 | G1766 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG 2 1823 |
Chain | Residue |
2 | U617 |
2 | A618 |
2 | A619 |
2 | A620 |
site_id | CC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1824 |
Chain | Residue |
2 | U562 |
2 | A579 |
site_id | CC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1825 |
Chain | Residue |
2 | A618 |
site_id | CC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1826 |
Chain | Residue |
2 | G1327 |
2 | G1329 |
site_id | CC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1827 |
Chain | Residue |
2 | A622 |
site_id | CC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG 2 1828 |
Chain | Residue |
2 | A100 |
2 | U101 |
2 | U102 |
2 | C360 |
site_id | CC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1830 |
Chain | Residue |
2 | G1108 |
2 | G1109 |
site_id | CC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1831 |
Chain | Residue |
2 | U1768 |
site_id | CC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1832 |
Chain | Residue |
2 | G95 |
site_id | DC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG 2 1833 |
Chain | Residue |
2 | G1670 |
2 | G1671 |
2 | G1725 |
2 | U1726 |
site_id | DC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1834 |
Chain | Residue |
2 | U1628 |
2 | G1791 |
site_id | DC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG 2 1835 |
Chain | Residue |
2 | U169 |
2 | U266 |
2 | C267 |
G | GLN176 |
site_id | DC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1836 |
Chain | Residue |
2 | A459 |
2 | G460 |
site_id | DC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1837 |
Chain | Residue |
2 | G466 |
site_id | DC6 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1841 |
Chain | Residue |
2 | U1302 |
site_id | DC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1842 |
Chain | Residue |
2 | A978 |
site_id | DC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1844 |
Chain | Residue |
2 | A760 |
site_id | DC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1845 |
Chain | Residue |
2 | U8 |
2 | G1139 |
site_id | EC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1846 |
Chain | Residue |
2 | A514 |
2 | C530 |
site_id | EC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1849 |
Chain | Residue |
2 | U988 |
2 | C989 |
site_id | EC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1850 |
Chain | Residue |
2 | A212 |
site_id | EC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1852 |
Chain | Residue |
2 | U934 |
site_id | EC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1854 |
Chain | Residue |
2 | G1392 |
site_id | EC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1855 |
Chain | Residue |
2 | C1158 |
2 | U1282 |
site_id | EC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1856 |
Chain | Residue |
2 | A1467 |
T | ASN85 |
site_id | EC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1857 |
Chain | Residue |
2 | A1201 |
2 | C1455 |
site_id | EC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1858 |
Chain | Residue |
2 | G1200 |
2 | A1598 |
2 | C1600 |
site_id | FC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1859 |
Chain | Residue |
2 | C1429 |
site_id | FC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1860 |
Chain | Residue |
2 | A1195 |
2 | C1196 |
U | LYS77 |
site_id | FC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1861 |
Chain | Residue |
2 | G1267 |
2 | U1268 |
site_id | FC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1862 |
Chain | Residue |
2 | G1272 |
2 | C1273 |
2 | G1426 |
site_id | FC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1863 |
Chain | Residue |
2 | G1539 |
2 | C1566 |
site_id | FC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1864 |
Chain | Residue |
2 | U1520 |
2 | U1518 |
site_id | FC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1865 |
Chain | Residue |
2 | C1273 |
2 | G1426 |
2 | G1427 |
site_id | FC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1866 |
Chain | Residue |
2 | A1201 |
2 | A1202 |
2 | C1597 |
site_id | FC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1868 |
Chain | Residue |
2 | U118 |
I | ASN52 |
site_id | GC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1869 |
Chain | Residue |
2 | C249 |
2 | A250 |
site_id | GC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1870 |
Chain | Residue |
2 | C423 |
site_id | GC3 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1871 |
Chain | Residue |
2 | A603 |
site_id | GC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1872 |
Chain | Residue |
2 | A634 |
2 | A635 |
site_id | GC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG 2 1874 |
Chain | Residue |
2 | G894 |
2 | A914 |
2 | U916 |
site_id | GC6 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG 2 1875 |
Chain | Residue |
2 | G941 |
a | GLY16 |
site_id | GC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1876 |
Chain | Residue |
2 | U967 |
site_id | GC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG 2 1877 |
Chain | Residue |
2 | A970 |
site_id | GC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN a 500 |
Chain | Residue |
a | CYS23 |
a | CYS26 |
a | CYS74 |
a | CYS77 |
site_id | HC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN b 101 |
Chain | Residue |
b | CYS37 |
b | GLY39 |
b | CYS40 |
b | CYS59 |
site_id | HC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG f 201 |
Chain | Residue |
f | TYR85 |
f | THR87 |
site_id | HC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN f 202 |
Chain | Residue |
f | CYS121 |
f | ILE128 |
f | CYS139 |
f | LYS141 |
f | CYS142 |
Functional Information from PROSITE/UniProt
site_id | PS00052 |
Number of Residues | 27 |
Details | RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIVkhT |
Chain | Residue | Details |
F | GLU93-THR119 |
site_id | PS00053 |
Number of Residues | 18 |
Details | RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAH |
Chain | Residue | Details |
W | GLY100-HIS117 |
site_id | PS00054 |
Number of Residues | 23 |
Details | RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD |
Chain | Residue | Details |
O | LEU102-ASP124 |
site_id | PS00055 |
Number of Residues | 8 |
Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR |
Chain | Residue | Details |
X | LYS62-ARG69 |
site_id | PS00056 |
Number of Residues | 13 |
Details | RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS |
Chain | Residue | Details |
L | GLY120-SER132 |
site_id | PS00299 |
Number of Residues | 26 |
Details | UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD |
Chain | Residue | Details |
f | LYS27-ASP52 |
site_id | PS00323 |
Number of Residues | 25 |
Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKvfnqveIrpemVGhyLGEFsiT |
Chain | Residue | Details |
P | ASN98-THR122 |
site_id | PS00360 |
Number of Residues | 19 |
Details | RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL |
Chain | Residue | Details |
Q | GLY71-LEU89 |
site_id | PS00362 |
Number of Residues | 31 |
Details | RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY |
Chain | Residue | Details |
N | VAL98-TYR128 |
site_id | PS00528 |
Number of Residues | 15 |
Details | RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWmLdK |
Chain | Residue | Details |
E | HIS8-LYS22 |
site_id | PS00529 |
Number of Residues | 23 |
Details | RIBOSOMAL_S24E Ribosomal protein S24e signature. YGggKStGFGlVYNSvadakkfE |
Chain | Residue | Details |
Y | TYR64-GLU86 |
site_id | PS00548 |
Number of Residues | 37 |
Details | RIBOSOMAL_S3 Ribosomal protein S3 signature. AKsmkfadGfLihSgqpVndfIEtatrhvlLrqGvlG |
Chain | Residue | Details |
D | ALA147-GLY183 |
site_id | PS00578 |
Number of Residues | 12 |
Details | RIBOSOMAL_S6E Ribosomal protein S6e signature. IAGGnDkqGfPM |
Chain | Residue | Details |
G | ILE52-MET63 |
site_id | PS00585 |
Number of Residues | 33 |
Details | RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI |
Chain | Residue | Details |
C | GLY98-ILE130 |
site_id | PS00628 |
Number of Residues | 20 |
Details | RIBOSOMAL_S19E Ribosomal protein S19e signature. PhkhvdaSgsInRkVLQsLE |
Chain | Residue | Details |
T | PRO90-GLU109 |
site_id | PS00632 |
Number of Residues | 25 |
Details | RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI |
Chain | Residue | Details |
J | LEU105-ILE129 |
site_id | PS00646 |
Number of Residues | 14 |
Details | RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHfwGlrVRGQ |
Chain | Residue | Details |
S | ARG123-GLN136 |
site_id | PS00678 |
Number of Residues | 15 |
Details | WD_REPEATS_1 Trp-Asp (WD) repeats signature. AVSAswDkTLRLWNL |
Chain | Residue | Details |
g | ALA81-LEU95 | |
g | ILE123-THR137 | |
g | ALA218-LEU232 |
site_id | PS00712 |
Number of Residues | 16 |
Details | RIBOSOMAL_S17E Ribosomal protein S17e signature. IqSKrLRNkIAGYtTH |
Chain | Residue | Details |
R | ILE41-HIS56 |
site_id | PS00733 |
Number of Residues | 8 |
Details | RIBOSOMAL_S26E Ribosomal protein S26e signature. YCISCAIH |
Chain | Residue | Details |
a | TYR73-HIS80 |
site_id | PS00948 |
Number of Residues | 14 |
Details | RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH |
Chain | Residue | Details |
H | LYS76-HIS89 |
site_id | PS00961 |
Number of Residues | 9 |
Details | RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL |
Chain | Residue | Details |
c | GLU58-LEU66 |
site_id | PS00962 |
Number of Residues | 12 |
Details | RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAARVHLG |
Chain | Residue | Details |
A | ALA14-GLY25 |
site_id | PS00963 |
Number of Residues | 25 |
Details | RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprsDaqaIkEssyvNIP |
Chain | Residue | Details |
A | PRO118-PRO142 |
site_id | PS00996 |
Number of Residues | 9 |
Details | RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA |
Chain | Residue | Details |
V | LEU11-ALA19 |
site_id | PS01168 |
Number of Residues | 33 |
Details | RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStvLctPtG |
Chain | Residue | Details |
b | LYS36-GLY68 |
site_id | PS01189 |
Number of Residues | 19 |
Details | RIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtSlvhDGLarGL |
Chain | Residue | Details |
M | ALA20-LEU38 |
site_id | PS01191 |
Number of Residues | 13 |
Details | RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL |
Chain | Residue | Details |
B | LEU61-LEU73 |
site_id | PS01193 |
Number of Residues | 20 |
Details | RIBOSOMAL_S8E Ribosomal protein S8e signature. RaaTGAkraqf.RkKrKfELG |
Chain | Residue | Details |
I | ARG11-GLY30 |
site_id | PS01262 |
Number of Residues | 23 |
Details | IF1A Eukaryotic initiation factor 1A signature. MlGnGRveasCfDGnkRmaHIrG |
Chain | Residue | Details |
i | MET41-GLY63 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 21 |
Details | ZN_FING: C4-type |
Chain | Residue | Details |
f | CYS121-CYS142 | |
G | SER233 |
site_id | SWS_FT_FI2 |
Number of Residues | 6 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) |
Chain | Residue | Details |
f | LYS6 | |
f | LYS11 | |
f | LYS27 | |
f | LYS29 | |
f | LYS33 | |
f | LYS63 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | CROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214 |
Chain | Residue | Details |
f | GLY76 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250 |
Chain | Residue | Details |
f | LYS48 |