3J9S

Single particle cryo-EM structure of rotavirus VP6 at 2.6 Angstrom resolution

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005198	molecular_function	structural molecule activity
A	0019028	cellular_component	viral capsid
A	0019031	cellular_component	viral envelope
A	0019064	biological_process	fusion of virus membrane with host plasma membrane
A	0039621	cellular_component	T=13 icosahedral viral capsid
A	0039626	cellular_component	viral intermediate capsid
A	0044423	cellular_component	virion component
A	0044650	biological_process	adhesion of symbiont to host cell
A	0046789	molecular_function	host cell surface receptor binding
A	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	2
Details	BINDING SITE FOR RESIDUE ZN A 501

Chain	Residue
A	HIS153
A	CL502

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site_id	AC2
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CL A 502

Chain	Residue
A	LYS154
A	ZN501

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site_id	AC3
Number of Residues	2
Details	BINDING SITE FOR RESIDUE CA A 504

Chain	Residue
A	VAL217
A	ASP286

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	11
Details	Region: {"description":"Interaction with the inner capsid protein VP2","evidences":[{"source":"HAMAP-Rule","id":"MF_04129","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"20122940","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_04129","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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