3J0P
Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0000055 | biological_process | ribosomal large subunit export from nucleus |
| B | 0002181 | biological_process | cytoplasmic translation |
| B | 0003723 | molecular_function | RNA binding |
| B | 0003735 | molecular_function | structural constituent of ribosome |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0005840 | cellular_component | ribosome |
| B | 0006412 | biological_process | translation |
| B | 0015934 | cellular_component | large ribosomal subunit |
| B | 0022625 | cellular_component | cytosolic large ribosomal subunit |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| L | 0003735 | molecular_function | structural constituent of ribosome |
| L | 0005840 | cellular_component | ribosome |
| L | 0006412 | biological_process | translation |
| L | 0015935 | cellular_component | small ribosomal subunit |
| S | 0003723 | molecular_function | RNA binding |
| S | 0003735 | molecular_function | structural constituent of ribosome |
| S | 0005840 | cellular_component | ribosome |
| S | 0006412 | biological_process | translation |
| X | 0003735 | molecular_function | structural constituent of ribosome |
| X | 0005840 | cellular_component | ribosome |
| X | 0006412 | biological_process | translation |
Functional Information from PROSITE/UniProt
| site_id | PS00055 |
| Number of Residues | 8 |
| Details | RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAvR |
| Chain | Residue | Details |
| L | LYS61-ARG68 |
| site_id | PS00323 |
| Number of Residues | 25 |
| Details | RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKefvnveVkfdmIGkyLAEFamT |
| Chain | Residue | Details |
| S | ASN103-THR127 |
| site_id | PS01199 |
| Number of Residues | 20 |
| Details | RIBOSOMAL_L1 Ribosomal protein L1 signature. IkqVprlLGpqLSKAGkFPT |
| Chain | Residue | Details |
| B | ILE117-THR136 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-methyllysine; by RKM5","evidences":[{"source":"PubMed","id":"21460220","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"17330950","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
