3I6D
Crystal structure of PPO from bacillus subtilis with AF
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004729 | molecular_function | oxygen-dependent protoporphyrinogen oxidase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006779 | biological_process | porphyrin-containing compound biosynthetic process |
| A | 0006783 | biological_process | heme biosynthetic process |
| A | 0016020 | cellular_component | membrane |
| A | 0016117 | biological_process | carotenoid biosynthetic process |
| A | 0016166 | molecular_function | phytoene dehydrogenase activity |
| A | 0016491 | molecular_function | oxidoreductase activity |
| B | 0004729 | molecular_function | oxygen-dependent protoporphyrinogen oxidase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005886 | cellular_component | plasma membrane |
| B | 0006779 | biological_process | porphyrin-containing compound biosynthetic process |
| B | 0006783 | biological_process | heme biosynthetic process |
| B | 0016020 | cellular_component | membrane |
| B | 0016117 | biological_process | carotenoid biosynthetic process |
| B | 0016166 | molecular_function | phytoene dehydrogenase activity |
| B | 0016491 | molecular_function | oxidoreductase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 24 |
| Details | BINDING SITE FOR RESIDUE FAD A 600 |
| Chain | Residue |
| A | GLY12 |
| A | LYS49 |
| A | GLY63 |
| A | PRO64 |
| A | ASP65 |
| A | SER66 |
| A | THR254 |
| A | LYS255 |
| A | VAL256 |
| A | TRP409 |
| A | SER412 |
| A | GLY13 |
| A | ALA443 |
| A | VAL448 |
| A | ILE450 |
| A | CYS453 |
| A | ACJ471 |
| A | GLY14 |
| A | ILE15 |
| A | THR16 |
| A | VAL40 |
| A | GLU41 |
| A | ALA42 |
| A | GLY48 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACJ A 471 |
| Chain | Residue |
| A | LEU68 |
| A | LYS71 |
| A | ILE176 |
| A | MET413 |
| A | FAD600 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PO4 A 472 |
| Chain | Residue |
| A | SER144 |
| A | LYS145 |
| A | THR146 |
| A | GLN150 |
| A | ARG158 |
| A | ARG159 |
| site_id | AC4 |
| Number of Residues | 25 |
| Details | BINDING SITE FOR RESIDUE FAD B 700 |
| Chain | Residue |
| B | GLY12 |
| B | GLY14 |
| B | ILE15 |
| B | THR16 |
| B | GLU41 |
| B | ALA42 |
| B | GLY48 |
| B | LYS49 |
| B | GLY63 |
| B | PRO64 |
| B | ASP65 |
| B | SER66 |
| B | LYS255 |
| B | VAL256 |
| B | THR284 |
| B | ALA285 |
| B | ALA289 |
| B | TRP409 |
| B | SER412 |
| B | GLY442 |
| B | ALA443 |
| B | VAL448 |
| B | ILE450 |
| B | CYS453 |
| B | ACJ471 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACJ B 471 |
| Chain | Residue |
| B | LYS71 |
| B | ILE176 |
| B | TYR177 |
| B | MET413 |
| B | VAL448 |
| B | FAD700 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PO4 B 472 |
| Chain | Residue |
| B | SER144 |
| B | LYS145 |
| B | THR146 |
| B | GLN150 |
| B | ARG158 |
| B | ARG159 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | BINDING: BINDING => ECO:0000269|PubMed:19944166 |
| Chain | Residue | Details |
| B | LYS49 | |
| B | GLY63 | |
| B | TRP409 | |
| B | VAL448 | |
| A | GLY12 | |
| A | GLU41 | |
| A | LYS49 | |
| A | GLY63 | |
| A | TRP409 | |
| A | VAL448 | |
| B | GLY12 | |
| B | GLU41 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000250|UniProtKB:P56601 |
| Chain | Residue | Details |
| A | VAL256 | |
| B | VAL256 |
