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3I5K

Crystal structure of the NS5B polymerase from Hepatitis C Virus (HCV) strain JFH1

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
A0003968molecular_functionRNA-directed RNA polymerase activity
A0039694biological_processviral RNA genome replication
B0003723molecular_functionRNA binding
B0003968molecular_functionRNA-directed RNA polymerase activity
B0039694biological_processviral RNA genome replication
C0003723molecular_functionRNA binding
C0003968molecular_functionRNA-directed RNA polymerase activity
C0039694biological_processviral RNA genome replication
D0003723molecular_functionRNA binding
D0003968molecular_functionRNA-directed RNA polymerase activity
D0039694biological_processviral RNA genome replication
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 567
ChainResidue
AARG48
AARG158
ALEU159
AHOH715
AHOH734
AHOH1543

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 568
ChainResidue
ALYS50
AHOH668
AILE11
ASER46
AALA49

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 569
ChainResidue
AARG48
ALYS51
AARG222
ACYS223
AHOH757
AHOH1758

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 570
ChainResidue
AARG379
AARG380
BARG380
BTYR382
BHOH599
BHOH971

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 A 571
ChainResidue
AARG231
AHOH654
AHOH749

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 B 567
ChainResidue
BARG48
BARG158
BLEU159
BHOH739
BHOH806

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 568
ChainResidue
BARG48
BLYS51
BTHR221
BARG222
BCYS223
BHOH1466

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 B 569
ChainResidue
BALA9
BILE11
BSER46
BHOH609

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 B 570
ChainResidue
BARG231
BHOH861
BHOH1009
BHOH1742

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 C 567
ChainResidue
CARG48
CARG158
CLEU159
CHOH611

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 C 568
ChainResidue
CARG48
CLYS51
CARG222
CCYS223
CHOH710
CHOH1691

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE PO4 C 569
ChainResidue
CARG231
CHOH1776

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 C 570
ChainResidue
CALA9
CILE11
CSER46
CALA49
CLYS50
CHOH1433

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 D 567
ChainResidue
DARG48
DLYS51
DARG222
DCYS223
DHOH905
DHOH1701

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 D 568
ChainResidue
DARG48
DVAL52
DARG158
DLEU159

site_idBC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE PO4 D 569
ChainResidue
DARG231

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 D 570
ChainResidue
DILE11
DSER46
DALA49
DHOH682
DHOH1766

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues472
DetailsDomain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"P26663","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

249697

PDB entries from 2026-02-25

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