3HXZ
Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with AlaSA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000166 | molecular_function | nucleotide binding |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0004813 | molecular_function | alanine-tRNA ligase activity |
| A | 0005524 | molecular_function | ATP binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006419 | biological_process | alanyl-tRNA aminoacylation |
| B | 0000166 | molecular_function | nucleotide binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0004813 | molecular_function | alanine-tRNA ligase activity |
| B | 0005524 | molecular_function | ATP binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006419 | biological_process | alanyl-tRNA aminoacylation |
| C | 0000166 | molecular_function | nucleotide binding |
| C | 0003676 | molecular_function | nucleic acid binding |
| C | 0004813 | molecular_function | alanine-tRNA ligase activity |
| C | 0005524 | molecular_function | ATP binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006419 | biological_process | alanyl-tRNA aminoacylation |
| D | 0000166 | molecular_function | nucleotide binding |
| D | 0003676 | molecular_function | nucleic acid binding |
| D | 0004813 | molecular_function | alanine-tRNA ligase activity |
| D | 0005524 | molecular_function | ATP binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006419 | biological_process | alanyl-tRNA aminoacylation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE A5A A 442 |
| Chain | Residue |
| A | ARG69 |
| A | ILE210 |
| A | ASN212 |
| A | VAL214 |
| A | ASP235 |
| A | ALA237 |
| A | GLY239 |
| A | ARG242 |
| A | HOH456 |
| A | HOH463 |
| A | HOH465 |
| A | ASP76 |
| A | HOH554 |
| A | HOH918 |
| A | ARG85 |
| A | HIS86 |
| A | HIS87 |
| A | PHE90 |
| A | MET92 |
| A | TRP170 |
| A | GLU209 |
| site_id | AC2 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE EPE A 443 |
| Chain | Residue |
| A | LYS124 |
| A | GLU125 |
| A | ARG152 |
| A | HOH824 |
| A | HOH1187 |
| A | HOH1481 |
| A | HOH1640 |
| C | SER25 |
| C | GLU346 |
| C | ASP347 |
| C | HOH1109 |
| site_id | AC3 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE EPE A 444 |
| Chain | Residue |
| A | SER25 |
| A | ARG66 |
| A | GLU346 |
| A | ASP347 |
| A | HOH848 |
| A | HOH908 |
| A | HOH1236 |
| A | HOH2080 |
| A | HOH2115 |
| D | GLU125 |
| D | ARG152 |
| site_id | AC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE HED A 445 |
| Chain | Residue |
| A | LYS18 |
| A | ARG60 |
| A | ASP100 |
| A | TYR101 |
| A | ASP105 |
| A | PHE109 |
| A | HOH764 |
| C | ARG396 |
| C | ARG434 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE HED A 446 |
| Chain | Residue |
| A | PRO34 |
| A | ASN304 |
| A | HOH2378 |
| A | HOH2402 |
| site_id | AC6 |
| Number of Residues | 20 |
| Details | BINDING SITE FOR RESIDUE A5A B 442 |
| Chain | Residue |
| B | ARG69 |
| B | ASP76 |
| B | ARG85 |
| B | HIS86 |
| B | HIS87 |
| B | PHE90 |
| B | MET92 |
| B | TRP170 |
| B | GLU209 |
| B | ILE210 |
| B | ASN212 |
| B | ASP235 |
| B | ALA237 |
| B | GLY239 |
| B | ARG242 |
| B | HOH459 |
| B | HOH467 |
| B | HOH527 |
| B | HOH598 |
| B | HOH931 |
| site_id | AC7 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE EPE B 443 |
| Chain | Residue |
| B | GLU125 |
| B | ARG152 |
| B | HOH897 |
| B | HOH1139 |
| B | HOH1589 |
| B | HOH1829 |
| D | SER25 |
| D | GLU346 |
| D | ASP347 |
| D | HOH1137 |
| site_id | AC8 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE EPE B 444 |
| Chain | Residue |
| B | SER25 |
| B | ARG66 |
| B | GLU346 |
| B | ASP347 |
| B | HOH1118 |
| B | HOH1144 |
| B | HOH1201 |
| B | HOH1821 |
| B | HOH2418 |
| C | LYS124 |
| C | GLU125 |
| C | ARG152 |
| site_id | AC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE HED B 445 |
| Chain | Residue |
| B | ARG60 |
| B | PHE109 |
| B | HOH989 |
| B | HOH1287 |
| B | HOH2204 |
| D | ARG434 |
| B | LYS18 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE HED B 446 |
| Chain | Residue |
| B | PRO34 |
| B | ARG305 |
| B | HOH1485 |
| B | HOH1503 |
| B | HOH2059 |
| site_id | BC2 |
| Number of Residues | 21 |
| Details | BINDING SITE FOR RESIDUE A5A C 442 |
| Chain | Residue |
| C | ARG69 |
| C | ASP76 |
| C | ARG85 |
| C | HIS86 |
| C | HIS87 |
| C | PHE90 |
| C | MET92 |
| C | TRP170 |
| C | GLU209 |
| C | ILE210 |
| C | ASN212 |
| C | VAL214 |
| C | ASP235 |
| C | ALA237 |
| C | GLY239 |
| C | ARG242 |
| C | HOH446 |
| C | HOH456 |
| C | HOH460 |
| C | HOH511 |
| C | HOH1127 |
| site_id | BC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE HED C 443 |
| Chain | Residue |
| A | ARG434 |
| C | LYS18 |
| C | ARG60 |
| C | PHE109 |
| C | HOH1173 |
| C | HOH1486 |
| C | HOH1783 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE HED C 444 |
| Chain | Residue |
| C | PRO34 |
| C | ASN304 |
| C | ARG305 |
| C | HOH1470 |
| C | HOH2205 |
| site_id | BC5 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE A5A D 442 |
| Chain | Residue |
| D | ARG69 |
| D | ASP76 |
| D | ARG85 |
| D | HIS86 |
| D | HIS87 |
| D | PHE90 |
| D | MET92 |
| D | TRP170 |
| D | GLU183 |
| D | GLU209 |
| D | ILE210 |
| D | ASN212 |
| D | VAL214 |
| D | ASP235 |
| D | ALA237 |
| D | GLY239 |
| D | ARG242 |
| D | HOH446 |
| D | HOH453 |
| D | HOH555 |
| D | HOH593 |
| D | HOH1085 |
| site_id | BC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE HED D 443 |
| Chain | Residue |
| B | ARG396 |
| B | ARG434 |
| D | LYS18 |
| D | ARG60 |
| D | ASP100 |
| D | PHE109 |
| D | HOH687 |
| D | HOH1879 |
| site_id | BC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE HED D 444 |
| Chain | Residue |
| D | PRO34 |
| D | HOH2361 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"18723842","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"30274179","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |






