Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004129 | molecular_function | cytochrome-c oxidase activity |
| A | 0005886 | cellular_component | plasma membrane |
| A | 0006119 | biological_process | oxidative phosphorylation |
| A | 0006811 | biological_process | monoatomic ion transport |
| A | 0009060 | biological_process | aerobic respiration |
| A | 0015990 | biological_process | electron transport coupled proton transport |
| A | 0016020 | cellular_component | membrane |
| A | 0020037 | molecular_function | heme binding |
| A | 0022904 | biological_process | respiratory electron transport chain |
| A | 0045277 | cellular_component | respiratory chain complex IV |
| A | 0046872 | molecular_function | metal ion binding |
| A | 1902600 | biological_process | proton transmembrane transport |
| B | 0004129 | molecular_function | cytochrome-c oxidase activity |
| B | 0005507 | molecular_function | copper ion binding |
| B | 0016020 | cellular_component | membrane |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0022900 | biological_process | electron transport chain |
| C | 0002250 | biological_process | adaptive immune response |
| C | 0002376 | biological_process | immune system process |
| C | 0003823 | molecular_function | antigen binding |
| C | 0005576 | cellular_component | extracellular region |
| C | 0016064 | biological_process | immunoglobulin mediated immune response |
| C | 0019814 | cellular_component | immunoglobulin complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 28 |
| Details | BINDING SITE FOR RESIDUE HEA A 559 |
| Chain | Residue |
| A | LEU36 |
| A | VAL103 |
| A | GLY163 |
| A | TRP164 |
| A | TYR406 |
| A | PHE412 |
| A | HIS413 |
| A | MET416 |
| A | SER417 |
| A | ILE424 |
| A | MET452 |
| A | THR50 |
| A | ILE459 |
| A | PHE460 |
| A | GLN463 |
| A | ARG473 |
| A | ARG474 |
| A | TYR475 |
| A | SER496 |
| A | HOH584 |
| A | HOH623 |
| A | MET53 |
| A | ARG54 |
| A | TRP87 |
| A | ILE91 |
| A | HIS94 |
| A | MET98 |
| A | MET99 |
| site_id | AC2 |
| Number of Residues | 27 |
| Details | BINDING SITE FOR RESIDUE HEA A 560 |
| Chain | Residue |
| A | TRP164 |
| A | TRP272 |
| A | VAL279 |
| A | TYR280 |
| A | HIS325 |
| A | HIS326 |
| A | THR351 |
| A | GLY352 |
| A | GLY387 |
| A | GLY390 |
| A | LEU393 |
| A | SER394 |
| A | ASP399 |
| A | HIS403 |
| A | VAL408 |
| A | HIS411 |
| A | PHE412 |
| A | VAL415 |
| A | MET416 |
| A | ARG473 |
| A | PEO576 |
| A | HOH582 |
| A | HOH583 |
| A | HOH950 |
| A | HOH959 |
| B | VAL45 |
| B | ILE88 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CU1 A 561 |
| Chain | Residue |
| A | HIS276 |
| A | HIS325 |
| A | HIS326 |
| A | PEO576 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MN A 562 |
| Chain | Residue |
| A | HIS403 |
| A | ASP404 |
| A | HOH578 |
| B | GLU218 |
| B | HOH285 |
| B | HOH884 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA A 563 |
| Chain | Residue |
| A | GLU56 |
| A | HIS59 |
| A | GLY61 |
| A | GLN63 |
| A | HOH851 |
| A | HOH965 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE LDA A 564 |
| Chain | Residue |
| A | ASN457 |
| A | PHE461 |
| A | LMT572 |
| B | LMT279 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE LDA A 565 |
| Chain | Residue |
| A | LEU72 |
| A | ILE73 |
| A | LDA567 |
| A | LMT571 |
| site_id | AC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE LDA A 566 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE LDA A 567 |
| Chain | Residue |
| A | TYR52 |
| A | ALA70 |
| A | LEU72 |
| A | LDA565 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE LMT A 568 |
| Chain | Residue |
| A | TRP443 |
| A | LEU447 |
| A | PHE502 |
| A | LMT569 |
| A | HOH779 |
| site_id | BC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE LMT A 569 |
| Chain | Residue |
| A | PRO441 |
| A | TRP443 |
| A | GLY505 |
| A | TYR509 |
| A | LMT568 |
| D | VAL9 |
| site_id | BC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE LMT A 570 |
| Chain | Residue |
| A | LEU511 |
| A | PRO537 |
| A | LMT575 |
| A | HOH964 |
| A | ARG21 |
| A | LYS29 |
| A | LEU36 |
| A | MET435 |
| site_id | BC4 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE LMT A 571 |
| Chain | Residue |
| A | GLN58 |
| A | HIS59 |
| A | GLN63 |
| A | TYR64 |
| A | ALA74 |
| A | TYR494 |
| A | PHE497 |
| A | LDA565 |
| A | LMT572 |
| A | HOH593 |
| A | HOH771 |
| A | HOH787 |
| site_id | BC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE LMT A 572 |
| Chain | Residue |
| A | TYR484 |
| A | ASN487 |
| A | ILE488 |
| A | ILE491 |
| A | LDA564 |
| A | LMT571 |
| A | HOH787 |
| A | HOH1306 |
| A | HOH1325 |
| site_id | BC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE LMT A 573 |
| Chain | Residue |
| A | ILE367 |
| A | GLU368 |
| A | PHE369 |
| A | PHE377 |
| B | ASN61 |
| B | ARG62 |
| B | ARG63 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE LMT A 574 |
| Chain | Residue |
| A | MET24 |
| A | LEU130 |
| A | LEU133 |
| site_id | BC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE LMT A 575 |
| Chain | Residue |
| A | TRP22 |
| A | ARG438 |
| A | LEU511 |
| A | PHE512 |
| A | ARG516 |
| A | LMT570 |
| site_id | BC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PEO A 576 |
| Chain | Residue |
| A | HIS276 |
| A | HIS325 |
| A | HIS326 |
| A | HEA560 |
| A | CU1561 |
| site_id | CC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CU1 B 270 |
| Chain | Residue |
| B | CYS216 |
| B | GLU218 |
| B | CYS220 |
| B | HIS224 |
| B | CU1271 |
| site_id | CC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CU1 B 271 |
| Chain | Residue |
| B | HIS181 |
| B | CYS216 |
| B | CYS220 |
| B | MET227 |
| B | CU1270 |
| site_id | CC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE LDA B 272 |
| Chain | Residue |
| A | THR389 |
| A | HIS464 |
| B | ASN19 |
| B | LDA274 |
| site_id | CC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE LDA B 273 |
| Chain | Residue |
| B | HIS36 |
| B | PHE37 |
| B | LDA276 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE LDA B 274 |
| Chain | Residue |
| B | TYR40 |
| B | LDA272 |
| B | HOH1291 |
| site_id | CC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE LDA B 275 |
| Chain | Residue |
| B | ARG102 |
| B | LMT278 |
| B | LMT280 |
| site_id | CC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE LDA B 276 |
| Chain | Residue |
| B | HIS36 |
| B | TYR40 |
| B | LDA273 |
| site_id | CC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE LMT B 278 |
| Chain | Residue |
| B | PRO98 |
| B | ARG102 |
| B | GLU105 |
| B | LDA275 |
| site_id | CC9 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE LMT B 279 |
| Chain | Residue |
| A | PHE461 |
| A | TYR484 |
| A | TRP485 |
| A | LDA564 |
| B | ASN15 |
| B | GLY16 |
| B | MET18 |
| site_id | DC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE LMT B 280 |
| Chain | Residue |
| B | TRP33 |
| B | LEU87 |
| B | ILE99 |
| B | LDA275 |
| B | HOH1058 |
| B | HOH1118 |
| D | ASN28 |
| site_id | DC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE LMT B 281 |
| Chain | Residue |
| A | TRP363 |
| B | LEU52 |
| B | HIS73 |
| B | ASN74 |
| B | TRP81 |
| B | GLU140 |
| B | GLU142 |
| B | LMT283 |
| site_id | DC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE LMT B 282 |
| Chain | Residue |
| A | LEU342 |
| A | THR346 |
| A | VAL349 |
| B | VAL86 |
| B | LEU89 |
| site_id | DC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE LMT B 283 |
| Chain | Residue |
| A | PHE356 |
| B | PHE48 |
| B | LEU51 |
| B | LEU52 |
| B | ILE55 |
| B | ILE80 |
| B | VAL84 |
| B | LMT281 |
| B | HOH1330 |
Functional Information from PROSITE/UniProt
| site_id | PS00077 |
| Number of Residues | 55 |
| Details | COX1_CUB Heme-copper oxidase catalytic subunit, copper B binding region signature. WFFGHPeVyiiilpgfgiishvistfakkpifgylpmvlamaaigilgfvvwa..HH |
| Chain | Residue | Details |
| A | TRP272-HIS326 | |
| site_id | PS00078 |
| Number of Residues | 49 |
| Details | COX2 CO II and nitrous oxide reductase dinuclear copper centers signature. ViHawtipafavkqdavpgriaqlwfsvdqegvyfgq......CselCginHayM |
| Chain | Residue | Details |
| B | VAL179-MET227 | |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 30 |
| Details | Transmembrane: {"description":"Helical; Name=I"} |
| site_id | SWS_FT_FI2 |
| Number of Residues | 243 |
| Details | Topological domain: {"description":"Periplasmic"} |
| site_id | SWS_FT_FI3 |
| Number of Residues | 37 |
| Details | Transmembrane: {"description":"Helical; Name=II"} |
| site_id | SWS_FT_FI4 |
| Number of Residues | 38 |
| Details | Topological domain: {"description":"Cytoplasmic"} |
| site_id | SWS_FT_FI5 |
| Number of Residues | 24 |
| Details | Transmembrane: {"description":"Helical; Name=III"} |
| site_id | SWS_FT_FI6 |
| Number of Residues | 29 |
| Details | Transmembrane: {"description":"Helical; Name=IV"} |
| site_id | SWS_FT_FI7 |
| Number of Residues | 33 |
| Details | Transmembrane: {"description":"Helical; Name=V"} |
| site_id | SWS_FT_FI8 |
| Number of Residues | 36 |
| Details | Transmembrane: {"description":"Helical; Name=VI"} |
| site_id | SWS_FT_FI9 |
| Number of Residues | 27 |
| Details | Transmembrane: {"description":"Helical; Name=VII"} |
| site_id | SWS_FT_FI10 |
| Number of Residues | 31 |
| Details | Transmembrane: {"description":"Helical; Name=VIII"} |
| site_id | SWS_FT_FI11 |
| Number of Residues | 25 |
| Details | Transmembrane: {"description":"Helical; Name=IX"} |
| site_id | SWS_FT_FI12 |
| Number of Residues | 32 |
| Details | Transmembrane: {"description":"Helical; Name=X"} |
| site_id | SWS_FT_FI13 |
| Number of Residues | 28 |
| Details | Transmembrane: {"description":"Helical; Name=XI"} |
| site_id | SWS_FT_FI14 |
| Number of Residues | 35 |
| Details | Transmembrane: {"description":"Helical; Name=XII"} |
| site_id | SWS_FT_FI15 |
| Number of Residues | 3 |
| Details | Binding site: {"description":"axial binding residue"} |
| site_id | SWS_FT_FI16 |
| Number of Residues | 10 |
| Details | Binding site: {} |
| site_id | SWS_FT_FI17 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"1'-histidyl-3'-tyrosine (His-Tyr)"} |
| site_id | SWS_FT_FI18 |
| Number of Residues | 62 |
| Details | Transmembrane: {"description":"Helical"} |
| site_id | SWS_FT_FI19 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Pyrrolidone carboxylic acid","evidences":[{"source":"PubMed","id":"2820725","evidenceCode":"ECO:0000269"}]} |
| site_id | SWS_FT_FI20 |
| Number of Residues | 51 |
| Details | Region: {"description":"Framework-1"} |
| site_id | SWS_FT_FI21 |
| Number of Residues | 14 |
| Details | Region: {"description":"Complementarity-determining-1"} |
| site_id | SWS_FT_FI22 |
| Number of Residues | 27 |
| Details | Region: {"description":"Framework-2"} |
| site_id | SWS_FT_FI23 |
| Number of Residues | 22 |
| Details | Region: {"description":"Complementarity-determining-2"} |
| site_id | SWS_FT_FI24 |
| Number of Residues | 62 |
| Details | Region: {"description":"Framework-3"} |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1ar1 |
| Chain | Residue | Details |
| A | GLU278 | |
| A | LYS354 | |
| site_id | CSA2 |
| Number of Residues | 7 |
| Details | Annotated By Reference To The Literature 1ar1 |
| Chain | Residue | Details |
| A | ARG473 | |
| A | TYR280 | |
| A | HIS411 | |
| A | HIS276 | |
| A | ARG474 | |
| A | PHE412 | |
| A | HIS413 | |
