3HB3
High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-10-04 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9198 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 83.403, 150.473, 157.185 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.980 - 2.250 |
R-factor | 0.22024 |
Rwork | 0.218 |
R-free | 0.27996 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ar1 |
RMSD bond length | 0.031 |
RMSD bond angle | 2.683 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | EPMR |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 111.800 | 2.320 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.124 | 0.379 |
Number of reflections | 90709 | |
<I/σ(I)> | 14.2 | 3.2 |
Completeness [%] | 99.0 | 98.3 |
Redundancy | 4.9 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.5 | 277 | 25% glycerol, pH 5.5, VAPOR DIFFUSION, temperature 277K |