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3H6U

Crystal structure of the iGluR2 ligand-binding core (S1S2J-N754S) in complex with glutamate and NS1493 at 1.85 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE GLU A 264
ChainResidue
ATYR61
ATYR220
AHOH388
AHOH438
AHOH479
APRO89
ALEU90
ATHR91
AARG96
AGLY141
ASER142
ATHR143
AGLU193

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NS3 A 265
ChainResidue
AILE92
APRO105
AMET107
ASER108
ASER217
AGLY219
ASER242
AASP248
AHOH410
AHOH516
AHOH548
AHOH548
AHOH637

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 266
ChainResidue
AARG31
AHIS46
ALYS240
AGLN244
AGOL273
AHOH525
AHOH579
AHOH581

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 267
ChainResidue
AASP139
ASER140
ALYS144
AARG148
AHOH411
AHOH457
AHOH593
AHOH604

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 268
ChainResidue
AGLU27
AGLY28
AASN29
AGLU30
AARG149
AFLC274
AHOH349
AHOH612

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 269
ChainResidue
AASN22
ALEU26
AARG64
ALYS69
AHOH526
AHOH626
AHOH647

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 270
ChainResidue
ALYS82
ALYS116

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 271
ChainResidue
ASER194
AGLU198
AASN214
AHOH277
AHOH508
AHOH601

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL A 272
ChainResidue
AGLU33
ATRP254
ALYS258
AHOH412

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 273
ChainResidue
AGLU42
ALYS45
AHIS46
ALEU241
AGLN244
ASO4266
AHOH525
AHOH546
AHOH631

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FLC A 274
ChainResidue
AARG148
AARG149
ATRP159
AARG163
ASO4268

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO89
ATHR91
AARG96
ASER142
ATHR143
AGLU193

site_idSWS_FT_FI2
Number of Residues3
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
AARG148
ALYS240

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184

site_idSWS_FT_FI6
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3

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PDB entries from 2024-07-24

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