3GXO
Structure of the Mitomycin 7-O-methyltransferase MmcR with bound Mitomycin A
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008168 | molecular_function | methyltransferase activity |
A | 0008171 | molecular_function | O-methyltransferase activity |
A | 0032259 | biological_process | methylation |
A | 1901663 | biological_process | quinone biosynthetic process |
B | 0008168 | molecular_function | methyltransferase activity |
B | 0008171 | molecular_function | O-methyltransferase activity |
B | 0032259 | biological_process | methylation |
B | 1901663 | biological_process | quinone biosynthetic process |
C | 0008168 | molecular_function | methyltransferase activity |
C | 0008171 | molecular_function | O-methyltransferase activity |
C | 0032259 | biological_process | methylation |
C | 1901663 | biological_process | quinone biosynthetic process |
D | 0008168 | molecular_function | methyltransferase activity |
D | 0008171 | molecular_function | O-methyltransferase activity |
D | 0032259 | biological_process | methylation |
D | 1901663 | biological_process | quinone biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE SAH A 350 |
Chain | Residue |
A | MSE163 |
A | PHE241 |
A | LYS255 |
A | MQA351 |
A | HOH354 |
A | HOH361 |
A | HOH366 |
A | HOH377 |
A | HOH390 |
A | HOH399 |
A | SER167 |
A | GLY190 |
A | GLY191 |
A | GLY192 |
A | GLU213 |
A | ARG214 |
A | GLY239 |
A | ASP240 |
site_id | AC2 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE MQA A 351 |
Chain | Residue |
A | ASP110 |
A | PHE113 |
A | PHE159 |
A | ALA162 |
A | MSE163 |
A | VAL166 |
A | HIS256 |
A | HIS259 |
A | ASP260 |
A | ASN288 |
A | VAL301 |
A | LEU304 |
A | LEU308 |
A | SAH350 |
A | HOH371 |
A | HOH424 |
site_id | AC3 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE SAH D 350 |
Chain | Residue |
D | TRP146 |
D | MSE163 |
D | SER167 |
D | GLY190 |
D | GLY191 |
D | GLU213 |
D | ARG214 |
D | GLY239 |
D | ASP240 |
D | PHE241 |
D | LYS255 |
D | TRP261 |
D | MQA351 |
D | HOH385 |
D | HOH558 |
site_id | AC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE MQA D 351 |
Chain | Residue |
D | PHE113 |
D | PHE159 |
D | ALA162 |
D | HIS256 |
D | HIS259 |
D | ASP260 |
D | ASN288 |
D | LEU308 |
D | SAH350 |
D | HOH397 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CA D 352 |
Chain | Residue |
D | GLU20 |
D | ASP24 |
D | HOH405 |
site_id | AC6 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE SAH C 350 |
Chain | Residue |
C | MSE163 |
C | SER167 |
C | GLY190 |
C | GLY191 |
C | GLY192 |
C | GLU213 |
C | ARG214 |
C | VAL217 |
C | ASP240 |
C | PHE241 |
C | LYS255 |
C | MQA351 |
C | HOH364 |
C | HOH381 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CA D 353 |
Chain | Residue |
D | GLU134 |
D | ASP262 |
site_id | AC8 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE MQA C 351 |
Chain | Residue |
C | PHE113 |
C | PHE159 |
C | ALA162 |
C | MSE163 |
C | VAL166 |
C | HIS256 |
C | HIS259 |
C | ASP260 |
C | ASN288 |
C | LEU304 |
C | LEU308 |
C | SAH350 |
C | HOH372 |
C | HOH467 |
site_id | AC9 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE SAH B 350 |
Chain | Residue |
B | ASP240 |
B | PHE241 |
B | LYS255 |
B | HIS256 |
B | MQA351 |
B | HOH377 |
B | HOH380 |
B | HOH384 |
B | HOH573 |
B | MSE163 |
B | SER167 |
B | GLY190 |
B | GLY191 |
B | GLY192 |
B | GLU213 |
B | ARG214 |
site_id | BC1 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE MQA B 351 |
Chain | Residue |
B | ASP110 |
B | PHE113 |
B | PHE159 |
B | ALA162 |
B | MSE163 |
B | HIS256 |
B | HIS259 |
B | ASP260 |
B | ASN288 |
B | LEU304 |
B | LEU308 |
B | SAH350 |
B | HOH381 |
B | HOH456 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: Proton acceptor => ECO:0000305|PubMed:21538548 |
Chain | Residue | Details |
A | HIS259 | |
D | HIS259 | |
C | HIS259 | |
B | HIS259 |
site_id | SWS_FT_FI2 |
Number of Residues | 24 |
Details | BINDING: BINDING => ECO:0000269|PubMed:21538548 |
Chain | Residue | Details |
A | SER167 | |
D | ASP240 | |
D | LYS255 | |
D | ASN288 | |
C | SER167 | |
C | GLY190 | |
C | GLU213 | |
C | ASP240 | |
C | LYS255 | |
C | ASN288 | |
B | SER167 | |
A | GLY190 | |
B | GLY190 | |
B | GLU213 | |
B | ASP240 | |
B | LYS255 | |
B | ASN288 | |
A | GLU213 | |
A | ASP240 | |
A | LYS255 | |
A | ASN288 | |
D | SER167 | |
D | GLY190 | |
D | GLU213 |