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3GVO

Structure and RNA binding of the mouse Pumilio-2 Puf Domain

Functional Information from GO Data
ChainGOidnamespacecontents
A0003723molecular_functionRNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 1
ChainResidue
AHOH32
AHOH217
AHOH269
AARG742
AGLN745
ATYR778
AGLU859
ACYS860
AGOL1058

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 1057
ChainResidue
AHOH13
AHOH154
AHOH318
APHE719
ALEU722
AASP726

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 1058
ChainResidue
AGOL1
AHOH200
AHOH215
AHOH269
AHOH414
AGLN745
ATYR778
AGLN781
ALYS782
AGLU821

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 1059
ChainResidue
AHOH266
AGLY729
AGLU762
AGLY947
AGLN984

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE DTD A 1060
ChainResidue
AHOH8
AHOH8
AHOH423
AHOH423
ALEU789
ALEU793
ALEU793
ASER824
ASER824
AGLN827
AGLN827

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues35
DetailsRepeat: {"description":"Pumilio 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues35
DetailsRepeat: {"description":"Pumilio 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues35
DetailsRepeat: {"description":"Pumilio 4"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues35
DetailsRepeat: {"description":"Pumilio 5"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues35
DetailsRepeat: {"description":"Pumilio 6"}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues35
DetailsRepeat: {"description":"Pumilio 7"}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues42
DetailsRepeat: {"description":"Pumilio 8"}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues12
DetailsRegion: {"description":"Adenine-nucleotide binding in RNA target","evidences":[{"source":"UniProtKB","id":"Q14671","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues12
DetailsRegion: {"description":"Uracil-nucleotide binding in RNA target","evidences":[{"source":"UniProtKB","id":"Q14671","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues4
DetailsRegion: {"description":"Non-specific-nucleotide binding in RNA target","evidences":[{"source":"UniProtKB","id":"Q14671","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues4
DetailsRegion: {"description":"Guanine-nucleotide binding in RNA target","evidences":[{"source":"UniProtKB","id":"Q14671","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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