3GK0

Crystal structure of pyridoxal phosphate biosynthetic protein from Burkholderia pseudomallei

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0008615	biological_process	pyridoxine biosynthetic process
A	0016740	molecular_function	transferase activity
A	0016769	molecular_function	transferase activity, transferring nitrogenous groups
A	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0008615	biological_process	pyridoxine biosynthetic process
B	0016740	molecular_function	transferase activity
B	0016769	molecular_function	transferase activity, transferring nitrogenous groups
B	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0008615	biological_process	pyridoxine biosynthetic process
C	0016740	molecular_function	transferase activity
C	0016769	molecular_function	transferase activity, transferring nitrogenous groups
C	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
D	0005737	cellular_component	cytoplasm
D	0005829	cellular_component	cytosol
D	0008615	biological_process	pyridoxine biosynthetic process
D	0016740	molecular_function	transferase activity
D	0016769	molecular_function	transferase activity, transferring nitrogenous groups
D	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0008615	biological_process	pyridoxine biosynthetic process
E	0016740	molecular_function	transferase activity
E	0016769	molecular_function	transferase activity, transferring nitrogenous groups
E	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
F	0005737	cellular_component	cytoplasm
F	0005829	cellular_component	cytosol
F	0008615	biological_process	pyridoxine biosynthetic process
F	0016740	molecular_function	transferase activity
F	0016769	molecular_function	transferase activity, transferring nitrogenous groups
F	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
G	0005737	cellular_component	cytoplasm
G	0005829	cellular_component	cytosol
G	0008615	biological_process	pyridoxine biosynthetic process
G	0016740	molecular_function	transferase activity
G	0016769	molecular_function	transferase activity, transferring nitrogenous groups
G	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity
H	0005737	cellular_component	cytoplasm
H	0005829	cellular_component	cytosol
H	0008615	biological_process	pyridoxine biosynthetic process
H	0016740	molecular_function	transferase activity
H	0016769	molecular_function	transferase activity, transferring nitrogenous groups
H	0033856	molecular_function	pyridoxine 5'-phosphate synthase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 B 258

Chain	Residue
B	THR29
B	TYR31
B	HOH271
B	HOH430
E	HIS203
E	HIS223

---

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE DXP C 258

Chain	Residue
C	HIS228
C	HOH283
H	THR29
H	TYR31
C	TYR204
C	HIS223
C	ALA224

---

site_id	AC3
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 D 258

Chain	Residue
D	HIS203
D	HIS223
D	ALA224
D	HOH267
F	THR29
F	TYR31

---

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE PO4 E 258

Chain	Residue
B	HIS203
B	HIS223
E	THR29
E	TYR31
E	HOH266

---

site_id	AC5
Number of Residues	9
Details	BINDING SITE FOR RESIDUE DXP F 258

Chain	Residue
D	THR29
D	TYR31
F	TYR204
F	HIS223
F	ALA224
F	HIS228
F	HOH287
F	HOH342
F	HOH799

---

site_id	AC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 G 258

Chain	Residue
A	HIS203
A	HIS223
A	ALA224
G	THR29
G	HOH271
G	HOH442

---

site_id	AC7
Number of Residues	9
Details	BINDING SITE FOR RESIDUE DXP G 259

Chain	Residue
A	THR29
A	TYR31
G	HIS203
G	HIS223
G	ALA224
G	HIS228
G	HOH267
G	HOH273
G	HOH850

---

site_id	AC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE PO4 H 258

Chain	Residue
C	THR29
C	TYR31
H	HIS203
H	ALA224
H	HOH269
H	HOH270

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	16
Details	Active site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_00279","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	8
Details	Active site: {"description":"Proton donor","evidences":[{"source":"HAMAP-Rule","id":"MF_00279","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	64
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00279","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	8
Details	Site: {"description":"Transition state stabilizer","evidences":[{"source":"HAMAP-Rule","id":"MF_00279","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---