Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004590 | molecular_function | orotidine-5'-phosphate decarboxylase activity |
A | 0005829 | cellular_component | cytosol |
A | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
A | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
A | 0006222 | biological_process | UMP biosynthetic process |
A | 0016829 | molecular_function | lyase activity |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
B | 0004590 | molecular_function | orotidine-5'-phosphate decarboxylase activity |
B | 0005829 | cellular_component | cytosol |
B | 0006207 | biological_process | 'de novo' pyrimidine nucleobase biosynthetic process |
B | 0006221 | biological_process | pyrimidine nucleotide biosynthetic process |
B | 0006222 | biological_process | UMP biosynthetic process |
B | 0016829 | molecular_function | lyase activity |
B | 0016831 | molecular_function | carboxy-lyase activity |
B | 0044205 | biological_process | 'de novo' UMP biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE UP6 A 301 |
Chain | Residue |
A | SER35 |
A | GLN215 |
A | TYR217 |
A | GLY234 |
A | ARG235 |
A | HOH274 |
A | HOH278 |
A | HOH283 |
A | HOH306 |
A | HOH358 |
B | ASP96 |
A | ASP37 |
B | ILE97 |
B | THR100 |
A | LYS59 |
A | HIS61 |
A | ASP91 |
A | LYS93 |
A | LEU153 |
A | SER154 |
A | PRO202 |
site_id | AC2 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE UP6 B 301 |
Chain | Residue |
A | ASP96 |
A | ILE97 |
A | THR100 |
B | SER35 |
B | ASP37 |
B | LYS59 |
B | HIS61 |
B | ASP91 |
B | LYS93 |
B | LEU153 |
B | SER154 |
B | PRO202 |
B | GLN215 |
B | TYR217 |
B | GLY234 |
B | ARG235 |
B | HOH282 |
B | HOH287 |
B | HOH294 |
B | HOH314 |
B | HOH387 |
Functional Information from PROSITE/UniProt
site_id | PS00156 |
Number of Residues | 14 |
Details | OMPDECASE Orotidine 5'-phosphate decarboxylase active site. LFeDrKfaDIGnTV |
Chain | Residue | Details |
A | LEU88-VAL101 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor |
Chain | Residue | Details |
A | LYS93 | |
B | LYS93 | |
site_id | SWS_FT_FI2 |
Number of Residues | 10 |
Details | BINDING: |
Chain | Residue | Details |
A | ASP37 | |
B | ARG235 | |
A | LYS59 | |
A | ASP91 | |
A | TYR217 | |
A | ARG235 | |
B | ASP37 | |
B | LYS59 | |
B | ASP91 | |
B | TYR217 | |
Chain | Residue | Details |
A | SER2 | |
B | SER2 | |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:12872131 |
Chain | Residue | Details |
A | LYS93 | |
A | LYS209 | |
A | LYS253 | |
B | LYS93 | |
B | LYS209 | |
B | LYS253 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
A | ASP91 | |
A | LYS93 | |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
B | ASP91 | |
B | LYS93 | |
site_id | CSA3 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
A | LYS59 | |
A | ASP96 | |
A | ASP91 | |
A | LYS93 | |
site_id | CSA4 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1dbt |
Chain | Residue | Details |
B | LYS59 | |
B | ASP96 | |
B | ASP91 | |
B | LYS93 | |