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3G00

Mth0212 in complex with a 9bp blunt end dsDNA at 1.7 Angstrom

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0006281biological_processDNA repair
A0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
A0016787molecular_functionhydrolase activity
A0016829molecular_functionlyase activity
A0046872molecular_functionmetal ion binding
A0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
B0003677molecular_functionDNA binding
B0003824molecular_functioncatalytic activity
B0004518molecular_functionnuclease activity
B0004519molecular_functionendonuclease activity
B0006281biological_processDNA repair
B0008311molecular_functiondouble-stranded DNA 3'-5' DNA exonuclease activity
B0016787molecular_functionhydrolase activity
B0016829molecular_functionlyase activity
B0046872molecular_functionmetal ion binding
B0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 266
ChainResidue
APHE59
APRO79
AHOH361
AHOH450

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PO4 A 267
ChainResidue
AGLU44
ALEU46
APRO47
AHOH396

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 268
ChainResidue
ATYR68
AGLU94
AARG121
AHOH445
AHOH700
IDC8
IDG9
AARG65

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 269
ChainResidue
AARG140
AGLY143
AARG144
AASN145
AASN227
AGLU229

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MPD A 270
ChainResidue
ALYS20
AGLY21
ATRP25
AMET244
AHOH348

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 271
ChainResidue
AASN10
AASN12
AGLU38
AASP247
AHIS248
AHOH504
AHOH714
AHOH718
IDG9

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 266
ChainResidue
BLYS20
BTRP25
BASP242
BVAL243
BMET244
BHOH317

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MPD B 267
ChainResidue
BARG65
BTYR68
BGLU94
BMET117
BARG121
HDC8

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 268
ChainResidue
BASN10
BASN12
BGLU38
BASP247
BHIS248
BHOH515
BHOH715
BHOH716
HDG9

Functional Information from PROSITE/UniProt
site_idPS00726
Number of Residues10
DetailsAP_NUCLEASE_F1_1 AP endonucleases family 1 signature 1. PDILCLQEIK
ChainResidueDetails
APRO31-LYS40

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000305|PubMed:20434457
ChainResidueDetails
AASN151
BASN151

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:20434457, ECO:0000269|Ref.7
ChainResidueDetails
AASN12
AGLU38
BASN12
BGLU38

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:20434457
ChainResidueDetails
AASN151
AASN153
AHIS248
BASN151
BASN153
BHIS248

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PDB entries from 2024-07-10

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