Functional Information from GO Data
Chain | GOid | namespace | contents |
B | 0000166 | molecular_function | nucleotide binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0003723 | molecular_function | RNA binding |
B | 0003724 | molecular_function | RNA helicase activity |
B | 0003729 | molecular_function | mRNA binding |
B | 0004386 | molecular_function | helicase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005524 | molecular_function | ATP binding |
B | 0005634 | cellular_component | nucleus |
B | 0005643 | cellular_component | nuclear pore |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005737 | cellular_component | cytoplasm |
B | 0006406 | biological_process | mRNA export from nucleus |
B | 0010494 | cellular_component | cytoplasmic stress granule |
B | 0016020 | cellular_component | membrane |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0016973 | biological_process | poly(A)+ mRNA export from nucleus |
B | 0070062 | cellular_component | extracellular exosome |
D | 0000166 | molecular_function | nucleotide binding |
D | 0003676 | molecular_function | nucleic acid binding |
D | 0003723 | molecular_function | RNA binding |
D | 0003724 | molecular_function | RNA helicase activity |
D | 0003729 | molecular_function | mRNA binding |
D | 0004386 | molecular_function | helicase activity |
D | 0005515 | molecular_function | protein binding |
D | 0005524 | molecular_function | ATP binding |
D | 0005634 | cellular_component | nucleus |
D | 0005643 | cellular_component | nuclear pore |
D | 0005654 | cellular_component | nucleoplasm |
D | 0005737 | cellular_component | cytoplasm |
D | 0006406 | biological_process | mRNA export from nucleus |
D | 0010494 | cellular_component | cytoplasmic stress granule |
D | 0016020 | cellular_component | membrane |
D | 0016787 | molecular_function | hydrolase activity |
D | 0016887 | molecular_function | ATP hydrolysis activity |
D | 0016973 | biological_process | poly(A)+ mRNA export from nucleus |
D | 0070062 | cellular_component | extracellular exosome |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE ADP B 480 |
Chain | Residue |
B | LEU70 |
B | LYS144 |
B | THR145 |
B | ALA146 |
B | PHE94 |
B | PHE112 |
B | ARG114 |
B | GLN119 |
B | GLN139 |
B | GLY141 |
B | THR142 |
B | GLY143 |
site_id | AC2 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE ADP D 480 |
Chain | Residue |
D | LEU70 |
D | PHE94 |
D | PHE112 |
D | ARG114 |
D | SER116 |
D | GLN119 |
D | GLN139 |
D | SER140 |
D | GLY141 |
D | THR142 |
D | GLY143 |
D | LYS144 |
D | THR145 |
D | ALA146 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 104 |
Details | Repeat: {"description":"Blade 1"} |
site_id | SWS_FT_FI2 |
Number of Residues | 112 |
Details | Repeat: {"description":"Blade 2"} |
site_id | SWS_FT_FI3 |
Number of Residues | 84 |
Details | Repeat: {"description":"Blade 3"} |
site_id | SWS_FT_FI4 |
Number of Residues | 90 |
Details | Repeat: {"description":"Blade 4"} |
site_id | SWS_FT_FI5 |
Number of Residues | 126 |
Details | Repeat: {"description":"Blade 5"} |
site_id | SWS_FT_FI6 |
Number of Residues | 110 |
Details | Repeat: {"description":"Blade 6"} |
site_id | SWS_FT_FI7 |
Number of Residues | 88 |
Details | Repeat: {"description":"Blade 7"} |
site_id | SWS_FT_FI8 |
Number of Residues | 726 |
Details | Region: {"description":"Seven-bladed beta propeller"} |
site_id | SWS_FT_FI9 |
Number of Residues | 4 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI10 |
Number of Residues | 2 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
site_id | SWS_FT_FI11 |
Number of Residues | 340 |
Details | Domain: {"description":"Helicase ATP-binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00541","evidenceCode":"ECO:0000255"}]} |
site_id | SWS_FT_FI12 |
Number of Residues | 56 |
Details | Motif: {"description":"Q motif"} |
site_id | SWS_FT_FI13 |
Number of Residues | 6 |
Details | Motif: {"description":"DEAD box"} |
site_id | SWS_FT_FI14 |
Number of Residues | 16 |
Details | Binding site: {} |