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3FEM

Structure of the synthase subunit Pdx1.1 (Snz1) of PLP synthase from Saccharomyces cerevisiae

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0006520biological_processamino acid metabolic process
A0006543biological_processL-glutamine catabolic process
A0008615biological_processpyridoxine biosynthetic process
A0016829molecular_functionlyase activity
A0016843molecular_functionamine-lyase activity
A0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
A0042819biological_processvitamin B6 biosynthetic process
A0042823biological_processpyridoxal phosphate biosynthetic process
A1903600cellular_componentglutaminase complex
B0005515molecular_functionprotein binding
B0006520biological_processamino acid metabolic process
B0006543biological_processL-glutamine catabolic process
B0008615biological_processpyridoxine biosynthetic process
B0016829molecular_functionlyase activity
B0016843molecular_functionamine-lyase activity
B0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
B0042819biological_processvitamin B6 biosynthetic process
B0042823biological_processpyridoxal phosphate biosynthetic process
B1903600cellular_componentglutaminase complex
C0005515molecular_functionprotein binding
C0006520biological_processamino acid metabolic process
C0006543biological_processL-glutamine catabolic process
C0008615biological_processpyridoxine biosynthetic process
C0016829molecular_functionlyase activity
C0016843molecular_functionamine-lyase activity
C0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
C0042819biological_processvitamin B6 biosynthetic process
C0042823biological_processpyridoxal phosphate biosynthetic process
C1903600cellular_componentglutaminase complex
D0005515molecular_functionprotein binding
D0006520biological_processamino acid metabolic process
D0006543biological_processL-glutamine catabolic process
D0008615biological_processpyridoxine biosynthetic process
D0016829molecular_functionlyase activity
D0016843molecular_functionamine-lyase activity
D0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
D0042819biological_processvitamin B6 biosynthetic process
D0042823biological_processpyridoxal phosphate biosynthetic process
D1903600cellular_componentglutaminase complex
E0005515molecular_functionprotein binding
E0006520biological_processamino acid metabolic process
E0006543biological_processL-glutamine catabolic process
E0008615biological_processpyridoxine biosynthetic process
E0016829molecular_functionlyase activity
E0016843molecular_functionamine-lyase activity
E0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
E0042819biological_processvitamin B6 biosynthetic process
E0042823biological_processpyridoxal phosphate biosynthetic process
E1903600cellular_componentglutaminase complex
F0005515molecular_functionprotein binding
F0006520biological_processamino acid metabolic process
F0006543biological_processL-glutamine catabolic process
F0008615biological_processpyridoxine biosynthetic process
F0016829molecular_functionlyase activity
F0016843molecular_functionamine-lyase activity
F0036381molecular_functionpyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity
F0042819biological_processvitamin B6 biosynthetic process
F0042823biological_processpyridoxal phosphate biosynthetic process
F1903600cellular_componentglutaminase complex
Functional Information from PROSITE/UniProt
site_idPS01235
Number of Residues19
DetailsPDXS_SNZ_1 PdxS/SNZ family signature. LPVVNFAAGGVATPADAAL
ChainResidueDetails
ALEU205-LEU223

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"description":"Schiff-base intermediate with D-ribose 5-phosphate","evidences":[{"source":"UniProtKB","id":"O59080","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues24
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"O59080","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20919991","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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