Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3FB4

Crystal structure of adenylate kinase from Marinibacillus marinus

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0004017molecular_functionAMP kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006139biological_processnucleobase-containing compound metabolic process
A0008270molecular_functionzinc ion binding
A0009165biological_processnucleotide biosynthetic process
A0016301molecular_functionkinase activity
A0016740molecular_functiontransferase activity
A0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
A0019205molecular_functionnucleobase-containing compound kinase activity
A0044209biological_processAMP salvage
A0046872molecular_functionmetal ion binding
A0046940biological_processnucleoside monophosphate phosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 217
ChainResidue
ACYS130
ACYS133
ACYS150
AASP153

site_idAC2
Number of Residues34
DetailsBINDING SITE FOR RESIDUE AP5 A 0
ChainResidue
AGLY14
ATHR15
ATHR31
AGLY32
AARG36
AMET53
AASN57
AVAL59
AGLY85
APHE86
AARG88
AGLN92
AARG123
AARG127
ATHR136
ATYR137
AHIS138
APHE141
AARG160
AARG171
AGLN199
AILE201
AHOH241
AHOH251
AHOH289
AHOH330
AHOH415
AHOH417
AHOH418
APRO9
AGLY10
AALA11
AGLY12
ALYS13

Functional Information from PROSITE/UniProt
site_idPS00113
Number of Residues12
DetailsADENYLATE_KINASE Adenylate kinase signature. FLLDGFPRtvaQ
ChainResidueDetails
APHE81-GLN92

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1zio
ChainResidueDetails
ALYS13
AARG127
AARG171
AARG160
AASP162
AASP163

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1zio
ChainResidueDetails
ALYS13
AASP151
AASP33
AARG127

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon